| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0796 |
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| Symbol | |
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| ID | 8379979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 857130 |
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| End bp | 859673 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003537 |
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| Product | VanW family protein |
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| Protein accession | YP_003160761 |
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| Protein GI | 256832034 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.823779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGG GCGCTGATCC TCAGCCCAAC AAGGCCAAGG ACCACCCCGG GGAGCCCGCA
ACCCCCAAGC CCACGCCATC ACAGGACACA CCTGGTGACA AGGCACCCAC CCCCGACGAC
AACGGTACTG CTCAACCAAC AACCGACACC TCACCTGGAA CATCCCCAGC AACTGAAGGT
GACGCGACTG CGACTTCAGT TCCAAAATCA GCAGGTTCGC CGACCACACC GGCTGACGCA
CAGGCCGCTG ACGACAAGGC TGCCAGCGGA AAAACCACCG ACGACAAGGC TGCCAGCGAA
AAAACCACCG ACGACAAGGC TGCCAGCGGA AAAACCACCG ACGACAAGGC TGCCAGCGGA
AAAACCACCG ACGACAAGGC TGCCAGCGAA AAGGCCACCG AGCCACAGGA AGCTACACCG
CCCGCGCCAA AGAAGCGCTC CGCAGCGCCC ATCCCCATCT TGTCCACACC ACCACAAGAT
CCGCTTGCGC CCATCAGCAG TGCACCAGAA AAAACAGGAC AACCATCGGC AGCGTCCCCA
CCGCAGCCAA CTCGTCAACC AGAGGCGAGC GACATTCCTG CCCCCAAGGC GGCAGACACA
CCCGCAACGC CACAACGCAC GTCGGTGAAA AGCACGACCT CACCCACCGC GGGACCAGCG
CCGACAAAGA AACTCGTGCC CCCAGCTAGC GTGCCAACCG CGCAAGCCGA GCCCCCCGCG
CAAGCCGAGC CCCCCGCGCA AGCCGAGCCC CCCGCGCAAG CCGAGCCCGC ATCCTCTGCC
AGCACATCAG CAAGCCCCGC ACGGGTCACT TTGGACGACA TCGACAATGC AGAACTCACA
CGAACCTGGC CACGCGCCGT GGGAATCGGA GCGGCAGTTC TCGTTGTTCT CGCCGGTCTT
TACCTCGGTG CCCAATGGGC ATTTGCGGAC ACTATTGCGC GGGGAACCAC GGTTGCTGGT
GTCGATGTGG GCGGGCAGTC CGCTGATGAT GCCCGCGCAA CCCTTGAATC CGAGCTCACT
CCCCGGCTCA CAGACACCGT GGAACTGACC GCCGAGGACA AACGGGCATC TTTTGACCCC
GCCGAAGCCG GAATCCAACT GAACCCAGAT GCCACTCTTG CAGATCTCAC CGGCTTTACC
CTCTCTCCGG CAAGGCTGTG GGACCACATC GTGGGAGGGT CCGATGTCAC TCCGATCCTC
GAGGTTGACG ACGCTGCGCT CACCGACACG ATGAAAGCGC TGTCAGTTGA CCTTGAAGAA
GAACCTGTCA ATGGAACCGT AGCATTTGCT GATGGTGAAG CAGTTGCGAG CAAAGCTGAG
GATGGGCGGG GGATCGACAT CGCCCAAGCC AAAGCGCGCA TCCTTGACAC AATTGTCACG
CCAACCCGCC CCATCGCACT CGACGTGGTC GTCAAAGAAC CTGAGATCAC GCAAGACATC
ACTGACGAAT TCTATGCCCA AGCGCAAACC ATGGCATCGG GACCTGTTGA GGTGTCAGTT
GATGGAAAAG ACATTGAACT TCCCGTCAAA GCGTTCACCA AAGCAATCAC GGTGAAAGCC
GAAAACGGGA CCATGGAGTT CTTGTTTGAT GGAGAACGCC TTGGCAAAGA AGTCCTTAAA
CGGGTGGATG GTCTCCTCAC AGAAGCAGAA GATGCCCATT TTGAGTTCCA AGACGGAAAA
CCTGTCATCG TGCCAGGGAA ATCAGGGACA CGCATCGACA ATGACCAATT GGCTCAAGCA
GTATCCACTG CAGCTACTCA GCAATTGGGG GAGCGCTCCA CCACTGTTGA ACTTGTTGAA
GCTGAGCCAG ATGCATCGGT GGAGGCACTA GAAGAGCTAG GGATCAAGGA ACGCGTCGCT
CACTTTAAAA CCCCACTGAC CAATGACTAC CTGCGTACGG AAAACCTTCG TCTCGCAGCC
CAACGGATCA CCGGGTACCT CGTGGAGCCC GGTGAGGAGT TCAACCTCCT TGAAGTAATT
GGACCTGTCA CTGCGGCCAA TGGGTATCAC GCCGCTGGTG TTGTGGTCAA CGGAATCCAC
ACAGATGGGG TTGGTGGTGG ACTGTCCCAA ATGTCAACCA CCACATACAA CGTCGGTTTC
TTCGCAGGAA TGACTGACAT TGCCCACCGT CCGCACTCCT ACCACTTTTC CCGCTACCCA
GAGGGCCGCG AATCCACGAT CTTCGTGGGA TCGATTGACA TGATTTGGCG CAATGACTCG
CCACACGGTG TACTCATGCG TTCGTACATT TCGGGCGGTA ATCTCCACGT GGAGGCCTGG
TCAACGAAAA CGTACAAGGT GGAAACAACC ACCTCGCCGC GATCCAATGT GGTCCCTGCG
ACGATGACGA CCGTGACAGC GGCGAACTGT GAAGCGCAAC CCATCGGTAG CCCAGGGTTC
ACTGTGACTG TGACCCGTAA AGTCACCGAA ATTGACAGCG GCAAGGTGGT CATCGACGAA
GCGAACACCT GGCGGTATAA ACCTGATCAT GGTGTGACGT GCAAGAAACC GGAGTCCAAG
AAAGACAAAG ACGAGGACGA ATAG
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| Protein sequence | MTQGADPQPN KAKDHPGEPA TPKPTPSQDT PGDKAPTPDD NGTAQPTTDT SPGTSPATEG
DATATSVPKS AGSPTTPADA QAADDKAASG KTTDDKAASE KTTDDKAASG KTTDDKAASG
KTTDDKAASE KATEPQEATP PAPKKRSAAP IPILSTPPQD PLAPISSAPE KTGQPSAASP
PQPTRQPEAS DIPAPKAADT PATPQRTSVK STTSPTAGPA PTKKLVPPAS VPTAQAEPPA
QAEPPAQAEP PAQAEPASSA STSASPARVT LDDIDNAELT RTWPRAVGIG AAVLVVLAGL
YLGAQWAFAD TIARGTTVAG VDVGGQSADD ARATLESELT PRLTDTVELT AEDKRASFDP
AEAGIQLNPD ATLADLTGFT LSPARLWDHI VGGSDVTPIL EVDDAALTDT MKALSVDLEE
EPVNGTVAFA DGEAVASKAE DGRGIDIAQA KARILDTIVT PTRPIALDVV VKEPEITQDI
TDEFYAQAQT MASGPVEVSV DGKDIELPVK AFTKAITVKA ENGTMEFLFD GERLGKEVLK
RVDGLLTEAE DAHFEFQDGK PVIVPGKSGT RIDNDQLAQA VSTAATQQLG ERSTTVELVE
AEPDASVEAL EELGIKERVA HFKTPLTNDY LRTENLRLAA QRITGYLVEP GEEFNLLEVI
GPVTAANGYH AAGVVVNGIH TDGVGGGLSQ MSTTTYNVGF FAGMTDIAHR PHSYHFSRYP
EGRESTIFVG SIDMIWRNDS PHGVLMRSYI SGGNLHVEAW STKTYKVETT TSPRSNVVPA
TMTTVTAANC EAQPIGSPGF TVTVTRKVTE IDSGKVVIDE ANTWRYKPDH GVTCKKPESK
KDKDEDE
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