Gene Jden_0733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0733 
Symbol 
ID8379918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp797269 
End bp798735 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content58% 
IMG OID645003476 
Productglycoside hydrolase family 10 
Protein accessionYP_003160700 
Protein GI256831973 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3693] Beta-1,4-xylanase 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0159525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC GCACTCTACT GGGCGCGCTG GCCCTGACCA CAGCTCTTGT GGTTCCTGGG 
GCTATCGCCC AAGCAATTCC TCTCACCACC GCACCTGCAG GTGTGGGGCA CGACTACGAG
CCACTCCGTG ACGCCGCTGA ACGTTCCGGC CGCTACTTCG GTTTCGCATA CGCGCCTCAC
CTTGCCCAAC AGGACGCGAA CTATCGCGCC ATCGCAGAAC GCGAATTCTC GATGGTGACC
GCAGAAAACA CCATGAAGTG GGAATCAGTA CAGCCCTCCG AAGGCCAATT CAACTGGAGT
GGAGCTGACG CCGTCGTCGA CTTCGCCCAA GCGAATAACC AAGAAGTGTA CGGGCACACA
CTCGTGTGGC ATTCGCAATT GCCAGGGTGG GCGAGCAACA TTTCGGACCC AACCCGGCTG
AGCACCGTCA TGAAAGATCA CATCAACGCG GTGGCTGGAC GGTACAAGGG GGACATTGCG
TACTGGGATG TTGTCAACGA AGCATTTGAA GACAACGGCA CTCGACGTCA GTCGGTGTTC
CAACGCGTCC TGGGTGATGG GTACATTGAG GAGGCGTTCC GCGAGGCACG CAGCGCGGAC
CCGAACGCGA AGCTCTGCAT CAATGACTAT TCCACTGACG CCATCAATTC CAAGTCCACA
GCCATCTACA ACCTGGTCCG TGACTTCAAG GCACGTGGTG TTCCCATCGA CTGTGTTGGT
CTTCAGTCCC ACCTGATCGT GGGGCAGGTT CCTTCCACTT ACCAGCAGAA CATCCAACGA
TTTGTGGACC TGGGTGTGGA GGTTCGCATC ACCGAGCTCG ACATTCGCAT GAACACGCCT
GCGAGCCAAC AAAACATCGC ACAGCAAGCT CAGGACTACA AGAAAGTGTT TGAGGCTTGC
TGGGCTGTTG ATGGCTGTAA TGGTGTGACA ATTTGGGGTA TCTCTGACCA GTACTCCTGG
ATCCCTGATG TGTTCTCGGG CGAGGGCGCT GCTCTTCCGT GGAACAGCGA CTACTCAGTC
AAGCCTGCCC TTGCGGAACT TGCCCAGGTG ATGGGGGCAA CAACTGGTGG ATCGACGCCT
GACCCCACAG ACCCACCCAC TGATCCTACT GATCCTCCAA CTGACCCCAC CGACCCGCCT
ACTGATCCCA CACCGGGCGC TTGCGAGGTC ACTGCCAGTG TGAACTCGTG GAACTCAGGC
TACACGGCGA CGGTGACCAT TAAGAACACC AGTTCCCAGG CGATTAATGG GTGGGAACTG
ACAGCAGCGC TTCCAGCAGG GCACTCGTTG GCTCAGGGGT GGAATGCGGT GTACACGCAG
TCTGGGTCGA CCCTGTCGGC TCGGAACGTG GCGTGGAACT CGACCCTGGC TCCCGGGGCA
AGTGTGAGCA TCGGGTTTAA TGCCAACTTC CAAGGGTCTC TTGGCTCCTT GAGTGGCTTC
ACGCTGAACG GAGCGGCCTG CAACTAG
 
Protein sequence
MNKRTLLGAL ALTTALVVPG AIAQAIPLTT APAGVGHDYE PLRDAAERSG RYFGFAYAPH 
LAQQDANYRA IAEREFSMVT AENTMKWESV QPSEGQFNWS GADAVVDFAQ ANNQEVYGHT
LVWHSQLPGW ASNISDPTRL STVMKDHINA VAGRYKGDIA YWDVVNEAFE DNGTRRQSVF
QRVLGDGYIE EAFREARSAD PNAKLCINDY STDAINSKST AIYNLVRDFK ARGVPIDCVG
LQSHLIVGQV PSTYQQNIQR FVDLGVEVRI TELDIRMNTP ASQQNIAQQA QDYKKVFEAC
WAVDGCNGVT IWGISDQYSW IPDVFSGEGA ALPWNSDYSV KPALAELAQV MGATTGGSTP
DPTDPPTDPT DPPTDPTDPP TDPTPGACEV TASVNSWNSG YTATVTIKNT SSQAINGWEL
TAALPAGHSL AQGWNAVYTQ SGSTLSARNV AWNSTLAPGA SVSIGFNANF QGSLGSLSGF
TLNGAACN