Gene Jden_0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0657 
Symbol 
ID8379842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp699493 
End bp700185 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content59% 
IMG OID645003394 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_003160624 
Protein GI256831897 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.415953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.211128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGTC CCGTGCTGCT TGCGTGCTCC CATGGAACTG ATAATCCGAC CGGCCAGCGT 
GTGGTGTCGA GCGTCCTTGA CCAGGTCAGA GTTCTCCTCC CTGACGTTGA GGTGATCGAG
ACCTATGTCG ATGTGCAGTT CCCCCAAATT GATACCGTCA TCCTTGAGGT GCCTCATCAT
CGGGATGTCA TTGTGGTTCC GGTGCTGTTG TCGGCGGGGT ACCACGTGCA TCATGACATT
GCGCAGGCGG TTGCCGCGCG CAATGAGGCA ACAGGTCCAC GGTCACAGGC GGTAGCGACA
CCGGCACTTG GGCCGCACCC GTTATTGGCT GACCTGGTGG TGGATCGGCT ACGACAGGGG
GGTGTTGACC GTGGTGATGT GGTGTTTGCT GCAGCTGGGT CTTCTGACGC GCGGGCCAGC
GCTGATGTCG AAGCGATGGT TGATTTGGTG TCACAGCGTT GGCAGGGGGC AGTGACCCCC
GGGTATTGTT CAGCAGCATC GCCGCGCGTT GGTGAGGTGA TCACGCCAAC TACAGATGCG
GTGGCGAATT ACTTGCTGGC ACCGGGCTTC TTTGATGATC GGCTCCATAA GGTGGCAGAT
CCACTGGGGG TTACTGTGTC AGCCCCGCTT GGGCATGACC CTCGTGTCGC GCAGGTGATT
GTTGACCGAT ACTGCCAGGC AGAGCAGCAC TGA
 
Protein sequence
MLRPVLLACS HGTDNPTGQR VVSSVLDQVR VLLPDVEVIE TYVDVQFPQI DTVILEVPHH 
RDVIVVPVLL SAGYHVHHDI AQAVAARNEA TGPRSQAVAT PALGPHPLLA DLVVDRLRQG
GVDRGDVVFA AAGSSDARAS ADVEAMVDLV SQRWQGAVTP GYCSAASPRV GEVITPTTDA
VANYLLAPGF FDDRLHKVAD PLGVTVSAPL GHDPRVAQVI VDRYCQAEQH