| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0639 |
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| Symbol | |
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| ID | 8379824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 679434 |
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| End bp | 680522 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645003376 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003160606 |
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| Protein GI | 256831879 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.898355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGACG GAATCAACCC TGTCCGCCTC CAGATGCCTC ACCCGGGTGA ACCACTCCCA
CGCTCCCGCC GACCGCACGT CACTGGCCCC CGGGACGCTA TGGGCCTCAC CCGTGACGCA
CTAGGACGCG ACAAGGAGGC GACGGGCGCC CCATCCGCCA TGACCACGGC AGACGATGCG
CCACCCCACG CTCCCGCCGA CTTGCGCACC ATCGCTGATT TTCTCGTCTG GCGGTTCCCC
CACGACACCG ATACCCTCCT GGCAAAACTG CGTGCAGGTG AAGTCGTCGA CGAGATCGGA
CGCCCCCTCA CCCTGGAGTC CCCCTACCGC CCTGGTGGGC TCATTCACCT CTACCGAGAC
CCAGACCCGG AACCCGAAGT CCCCTTTGCC TGCGATGTCC TGTTCGAAGA CGACGACCTC
TACGTGATCG ACAAACCACA CTTTCTCGCA TCAACACCCA AAGGGCGCTA CGTCACTGAG
ACCGCGCTCG TGCGACTACG CAAAGACACC GGAAACCCTG AACTCAGCCC CGCTCACCGA
CTTGACCGGC TCACCGCCGG AGTGCTCGTC TTCACCAAAC GTCGAGAACT CAGAGGCGCC
TACCAGGAGC TGTTTGCACA ACGACAAGTC ACCAAGGTGT ACCAGGCTGT CGCCCCCACC
AACCCAGCAG TTGACCTGCC TGCCACAGTC CGATCGCGCA TCGTCAAAGA ACACGGAATC
ATGCGGGCCC ACACCATGCC CGGTGAACCA AACACCGAAA CCCTTGTCAC ACTCACGGAC
ACTGCAACGC TGCCAGCAGG TCACGACGTT GCAGTCCAAG ACGTCGGTTT GTACACCCTG
TACCCGCACA CCGGAAAAAC GCACCAACTA CGCATCCACA TGGCGTCACT GGGGCTAGGG
ATCGTTTACG ACAACTATTA CCCGGACTTC TACCACGTCG AGTCCGACGA CTACCGTCAC
CCGCTGCAAC TCCTGTCTTC ACAGCTCGCG TTCACCGATC CCCTCAGCGG GGTACAACGT
GACTTCCGGT CCCGCAAGAC ACTGTCAGTG TGGGCGGACG CTCTCACCCA CACCCAACCA
CGCAGGTGA
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| Protein sequence | MRDGINPVRL QMPHPGEPLP RSRRPHVTGP RDAMGLTRDA LGRDKEATGA PSAMTTADDA
PPHAPADLRT IADFLVWRFP HDTDTLLAKL RAGEVVDEIG RPLTLESPYR PGGLIHLYRD
PDPEPEVPFA CDVLFEDDDL YVIDKPHFLA STPKGRYVTE TALVRLRKDT GNPELSPAHR
LDRLTAGVLV FTKRRELRGA YQELFAQRQV TKVYQAVAPT NPAVDLPATV RSRIVKEHGI
MRAHTMPGEP NTETLVTLTD TATLPAGHDV AVQDVGLYTL YPHTGKTHQL RIHMASLGLG
IVYDNYYPDF YHVESDDYRH PLQLLSSQLA FTDPLSGVQR DFRSRKTLSV WADALTHTQP
RR
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