Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0626 |
Symbol | |
ID | 8379811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 665776 |
End bp | 667356 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645003363 |
Product | YjeF-family domain protein |
Protein accession | YP_003160593 |
Protein GI | 256831866 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000297999 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGTGC GCGTTGCTGT GGTGGCGGTC GCGGTGCCTG GGGTGGGGCG TCACAATAGG GACATGATTG TTGGTGTGAG TGCACGACAG ATGCAGGTGG CTGAGAAGCC GTTGTTGGAT CGTGGGGTTG CGTTGATGGC GCGTGCATCG AGAGGTCTTG CGCAGTGTGT GGTGCAGGTT GTGCGGCAGC GGTGTGGGCA GGTTGCTGGT GCGCGGGTTG TGGTGTTGGT GGGGCAGGGC AATAACGGTG GTGATGCGTT GTTTGCTGCT GCGTTGCTGG CGCGCTTGCC GATGTCGGTG ACGGTGGCGC TGGTGGGGGA GAGGTGCCAC GGTGACGGGT TGGCTGCGGT CCGTGCATCG CAGGCGGTGG TGGTGACCCC CAGTGACGGT GCAGAGGTTG TTGCCCTGTG TGCGGGGGTG GATGTGGTGG TGGATGGGAT TGTGGGCATT GGCGCTCGCG GTGCGGTGCG GGGGTTGGCT GGTGATGCGT TGGCGTCGTG GTCGGCTCGT ACCAGGCGGG ATGGTGATCC TGTGTGGGTA GCTGTGGATG TTCCTTCTGG TGTGGATGCA TCGTCTGGTG AGGTTGCCGA TGCGAGGCGC ACGGTGCACG CGGATGTGAC GGTGACCTTT GGGGTGGCAA AGACGGGGCT GTTGGTTGCG CCGGGGGCGT TGTCCGCGGG GCGGGTGCAG GTGGTGGATA TTGGCGTAGA TGTGGGTGAG TGGGATGTGG TGAGTGTGGT TGGTGGTGAT CTTGGACCTG GTGGCTTGTG GGGGTGGTTG TGGGAGTTGC CGGCAGCAAC TGACCACAAG TACACCCGGG GGGTGGTGGG GGTGGATGCG GGGTCTGCTG TTTACCCGGG GGCTGGGGTG CTGGCGGCGC GTGCTGCTGC TGCGTGCGGT GTGGGAATGG TTCGTTATGA GGGGGACCGG GAGGTCGCCG GGGTTGTGGC TTCGGTTGCG CCGCATGTTG TGTCGGCCCG CGGGAGGGCG CAGGCGCGTG TGGTGGGGTC AGGGCAGGAA CCTGACGATG CGGTGGCTGA GCGGGTCCGG CACGCGATGT CGGCGGGGGC GCCTACTGTG CTTGATGCGG GTGCGTTGGG TGTTCTTGAC CGGTCGTTTG CGTTGAGTGA GCAAATGGTG TTGACGCCGC ATGCCGGTGA GTTGGCGGGG CTGTTGATGG CCTTTGGTGT GGAGGTGACT CGTGCGCAGG TGGAAGCGAG ACCGTTGTGG GCGGCGCGTT GTGCTGCGGA GGTGACGGGA GCGACCGTGG TGCTGAAGGG GGTGACTCCG GTGATTGCTG GCCCGGGGGT TACGTACGTG CAGCCCATTG AGGATGCGCG GGTGTCACGG TTGGCGACCG CTGGTTCAGG TGATGTGTTG GCCGGTGTCT TAGGGGCAGC GTTGGCGCGG TTGGTGGCGG TGAAAGCAGA TGCTGTGGGT GCGACGGATA TTGCAGGTGC AGTTGCGTGC GGGGTGTTGA CTCACCAGCT CGCTGCCCTT CAGGGAGGTG ATGGGCCGTT GACAGCGAGT GACCTGGTTG CCCACATTCC GGCGGCGATT GCGATGGTGT GTGCTTCGTG A
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Protein sequence | MVVRVAVVAV AVPGVGRHNR DMIVGVSARQ MQVAEKPLLD RGVALMARAS RGLAQCVVQV VRQRCGQVAG ARVVVLVGQG NNGGDALFAA ALLARLPMSV TVALVGERCH GDGLAAVRAS QAVVVTPSDG AEVVALCAGV DVVVDGIVGI GARGAVRGLA GDALASWSAR TRRDGDPVWV AVDVPSGVDA SSGEVADARR TVHADVTVTF GVAKTGLLVA PGALSAGRVQ VVDIGVDVGE WDVVSVVGGD LGPGGLWGWL WELPAATDHK YTRGVVGVDA GSAVYPGAGV LAARAAAACG VGMVRYEGDR EVAGVVASVA PHVVSARGRA QARVVGSGQE PDDAVAERVR HAMSAGAPTV LDAGALGVLD RSFALSEQMV LTPHAGELAG LLMAFGVEVT RAQVEARPLW AARCAAEVTG ATVVLKGVTP VIAGPGVTYV QPIEDARVSR LATAGSGDVL AGVLGAALAR LVAVKADAVG ATDIAGAVAC GVLTHQLAAL QGGDGPLTAS DLVAHIPAAI AMVCAS
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