Gene Jden_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0623 
Symbol 
ID8379808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp662471 
End bp664336 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content58% 
IMG OID645003360 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_003160590 
Protein GI256831863 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.485363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGAA TTGTTGGCTA CGTTGGGTCA GCTACCCCGT CTACGCGCCC GCTGGATGTG 
GCTTTGGAAG GCTTAGGGCG GTTGGAGTAC CGCGGGTATG ACTCTGCGGG TGTTGCCTTG
GTTGCCCCTG GTCGTGATGA GGTTGCGGTG GCGAAGAAGG CAGGGAAACT TGTCAATTTG
CGCACAGCGC TTGTTGAGTC GCCTCTTCCG CAGGCAACAG CGGCGATTGG TCACACGCGG
TGGGCCACCC ATGGTGCCCC CAGTGATCTC AACGCTCATC CTCATGTGGC GCTTGATGGT
CGTCTTGCGG TGATTCACAA CGGCATTATT GAGAACTTTT TTTCGCTGCG CTCTGAGTTG
TTGGAGGCAG GTGTTCAGTT CGTCTCTGAA ACTGATACGG AGGTGGCTGC GCATCTGCTT
GCGGCACAGT ATGAGCGGTG CGGGGACCTG ACCGAGGCGA TGCGTGTTGT TGCGCAACGT
CTTGAGGGGA CGTTCACGTT GTTGGCTGTT CACGCCGACC ACCCAGATAC GGTGGTGGGT
GCCCGCCACG ATTCCCCGCT GGTTGTGGGT CTTGGCGACG GCGAGAACTT CCTCGGTTCT
GATGTGGCGG CGTTTATCGC TCACACCAGA GAAGCGTTGG AGTTGGGGCA GGACCAGATC
GCCACGATCA CTCCAAATGC GGTGACGGTG ACAGATTTTG AGGGGCAGGT AGTAACCCCG
AAGCATTACA CCGTGGACTG GGATGCGTCT GCGGCAGAAA AGGGCGGTTT CTGGTCCTTC
ATGGCGAAGG AGATCGCTGA CCAGCCAAAA GCTGTGGCGG ACACCTTGTT GGGTCGAACC
AACGAGTCAG GGGACTTGAT CCTTGATGAT GCTCGTATTG ATGAAGCGAC TCTGCGCACG
ATTGACAAGA TCATTGTGGT GGCGTGTGGG ACTGCAGCCT ATGCGGGGCA CGTTGCGAAG
TACGCGATCG AGCATTGGTG TCGGATCCCG GTGGAGATCG AACTTGCCCA CGAGTTCCGG
TACCGTGACC CCATTGTTAC CCCCCGCACG TTGGTGGTGG CAATTTCCCA GTCAGGGGAA
ACCATGGACA CCCTCATGGC TGTGCGGCAC GCGCAGGAAC AGGGGGCAAA GGTGATCGCG
ATCGTGAATA CCCACGGCTC GACTATCCCG CGTGAGTCGG ACGCAGTGTT GTACACCCAT
GCTGGTCCTG AGGTGGCCGT CGCATCAACG AAGGCGTTTG TCTCCCAGAT CACGGCTGCC
TACATTCTCG GGCTCTACTT CGCTCAACTG CGGGGCAACA TGTTCCGCGA TGAGATTCAT
ACTGTGTTGG ATGAGTTGCG GGCCATGCCG GACAAGATCC AGGAGGTTCT TGACCGTGGT
GAACGGGTTC GTGAGATCGC CCGGTGGATG GCGGACACAT CGTCTGTGTT GTTCTTGGGT
CGCCATGTTG GGTTCCCTAT CGCGCTAGAA GGTGCCCTGA AACTCAAGGA ACTGGCGTAC
ATCCACGCTG AAGGGTTCGC TGCTGGCGAG TTGAAGCACG GTCCGATCGC TCTCATTGAA
CCGGGTCAAC CTGTGTTTGT TATTGTGCCG TCACCGCGTG GCCGTGACTC GCTGCATTCC
AAGGTTATTT CCAACATTCA GGAGATCCGC GCTCGCGGTG CACGGACGCT GGTCATCGCT
GAAGACGGTG ATGAGGCAGT GACCCCATTT GCTGATGAGG TGTTTTGGGT TCCGCAATGC
CCGACCTTGC TGTCGCCGTT GGTCACTGTT GTTCCGTTGC AGATTTTCGC GGCGGAGTTG
TCGCGGGCGA AGGGGTTGGA TGTTGACCAA CCGCGTAACC TCGCGAAGTC GGTGACGGTC
GAGTAG
 
Protein sequence
MCGIVGYVGS ATPSTRPLDV ALEGLGRLEY RGYDSAGVAL VAPGRDEVAV AKKAGKLVNL 
RTALVESPLP QATAAIGHTR WATHGAPSDL NAHPHVALDG RLAVIHNGII ENFFSLRSEL
LEAGVQFVSE TDTEVAAHLL AAQYERCGDL TEAMRVVAQR LEGTFTLLAV HADHPDTVVG
ARHDSPLVVG LGDGENFLGS DVAAFIAHTR EALELGQDQI ATITPNAVTV TDFEGQVVTP
KHYTVDWDAS AAEKGGFWSF MAKEIADQPK AVADTLLGRT NESGDLILDD ARIDEATLRT
IDKIIVVACG TAAYAGHVAK YAIEHWCRIP VEIELAHEFR YRDPIVTPRT LVVAISQSGE
TMDTLMAVRH AQEQGAKVIA IVNTHGSTIP RESDAVLYTH AGPEVAVAST KAFVSQITAA
YILGLYFAQL RGNMFRDEIH TVLDELRAMP DKIQEVLDRG ERVREIARWM ADTSSVLFLG
RHVGFPIALE GALKLKELAY IHAEGFAAGE LKHGPIALIE PGQPVFVIVP SPRGRDSLHS
KVISNIQEIR ARGARTLVIA EDGDEAVTPF ADEVFWVPQC PTLLSPLVTV VPLQIFAAEL
SRAKGLDVDQ PRNLAKSVTV E