| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0613 |
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| Symbol | |
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| ID | 8379798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 653417 |
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| End bp | 654421 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645003350 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_003160580 |
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| Protein GI | 256831853 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCATTG CACAACGTCC CACCCTCTCA GAAGAGGTTA TTTCAGACGC TCGTTCCCGG
TTCACCATTG AGCCGCTGGA ACCAGGGTTT GGGTACACGC TCGGTAACTC GCTGCGTCGT
ACATTGCTGT CTTCCATTCC TGGTGCGGCA GTGACCTCAA TCCGTATTGA CGGGGTTCTC
CACGAGTTCT CAACGATCAC CGGTGTGAAA GAAGACGTCA CTGAGATCAT TTTGAACGTG
AAGAACCTGG TCCTGTCATC GGAAAACGAT GAGCCAGTGG TGATGTACTT GCGTAAGCAA
GGTGCTGGTG TTGTGACAGC AGCGGACATC GTACCGCCAG CAGGGGTCGA GGTACATAAC
CCTGACCTGC ACATCGCAAC ACTGAACGAC AAAGGTAAGC TCGAAATTGA GCTGACCGTT
GAGCGTGGGC GTGGATATGT ATCAGCGCAG CAGAACAAGT CGATGGACGC CGAAATTGGT
CGGATCCCCG TTGACTCAAT CTACTCACCC GTGTTGAAAG TCACTTACAA AGTGGAAGCA
ACACGTGTGG AGCAGCGGAC CGACTTTGAC CGACTCATTG TCGATGTGGA AACCAAGTCG
TCGATCGTAC CTCGCGACGC GCTGGCTTCT GCTGGGAAGA CACTGGTTGA GTTGTTCGGT
TTGGCTCGTG AGCTCAACGT AGAAGCTGAA GGAATCGAGA TTGGTCCTTC ACCTACTGAT
GCTGCACTCG CTGCTGACCT TGCTTTGCCT ATCGAGGATC TGAACCTGAC GATCCGTTCG
TACAACTGCC TGAAGCGTGA GGGCATCCAC CAGGTGGGTG AACTTGTCGC ACGCAGTGAG
GCAGATCTGC TCGACATCCG TAACTTTGGT GCGAAGTCAA TCAACGAGGT GAAAGAAAAG
CTCCACGAGC TTGGCTTGTC GCTGAAAGAC TCACCGCTGG ACTTCCAGCC ATCATCTGAG
TCGGACTACT TTGACGACGG TGACGTCGAC GAGCAGTACA ACTGA
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| Protein sequence | MLIAQRPTLS EEVISDARSR FTIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSIRIDGVL
HEFSTITGVK EDVTEIILNV KNLVLSSEND EPVVMYLRKQ GAGVVTAADI VPPAGVEVHN
PDLHIATLND KGKLEIELTV ERGRGYVSAQ QNKSMDAEIG RIPVDSIYSP VLKVTYKVEA
TRVEQRTDFD RLIVDVETKS SIVPRDALAS AGKTLVELFG LARELNVEAE GIEIGPSPTD
AALAADLALP IEDLNLTIRS YNCLKREGIH QVGELVARSE ADLLDIRNFG AKSINEVKEK
LHELGLSLKD SPLDFQPSSE SDYFDDGDVD EQYN
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