Gene Jden_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0563 
Symbol 
ID8379748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp610650 
End bp611084 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content58% 
IMG OID645003298 
ProductMaoC domain protein dehydratase 
Protein accessionYP_003160530 
Protein GI256831803 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.127994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0650042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACT GGGCTGTCCC AGCGTTTGAT GACGTTTCTG TTGGTGACGT GGTTGCTCAA 
CTCTCCTACG AAGTCACCCG TCAAGATTTG GTGCGTTACG CGGGCGCTAG CGGCGATCTC
AACCCAATCC ACTTCAACGA TGCGTTTGCG CACTCTGTGG GGCTCGATGG TGTCATTGCC
CATGGGATGC ACACGATGGG TCGTGCTATG GCGGTGGCGG AGCAGTGGCT TGGTGATCAG
CGAGCTGTTG TGGATATCCA GACTCGGTTT GCGCGGCCGA TTCCAGTCCC GGCGTTGGCT
AGCGCAGTCG TTGAGGTGAC TGTCACGGTC GGGGCCCGCG ATGAAGAACT GCGTAGGGTG
CGGTTGGATA TCACTGTGAT CAGTGGCGGG GTGAAAGTGC TCGCCAAGGC GCAGATGGTC
GCTCAGTTGG CTTAA
 
Protein sequence
MNNWAVPAFD DVSVGDVVAQ LSYEVTRQDL VRYAGASGDL NPIHFNDAFA HSVGLDGVIA 
HGMHTMGRAM AVAEQWLGDQ RAVVDIQTRF ARPIPVPALA SAVVEVTVTV GARDEELRRV
RLDITVISGG VKVLAKAQMV AQLA