| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0534 |
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| Symbol | |
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| ID | 8379719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 576232 |
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| End bp | 578061 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645003266 |
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| Product | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase |
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| Protein accession | YP_003160501 |
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| Protein GI | 256831774 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.181023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0693922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATGT CTGCGCCTGA CCTGTCCGCT GAGTTGCCCA CGTCGTTGAG CACGGCGTGG
GAGCTGATCA CCCAGTTTGT GGCGCTTGGT GGACGCCACG TGGTTCTTTC GCCAGGATCT
CGGTCCGCGC CTTTGGCGTA TGTCGCAGCG GTTGCCCATG AGGCTGGGTT GCTGACACTG
CATGTGCGCA TCGACGAACG AAGCGCCGCG TTTGTCGCGT TAGGGATGGC CAAAGCGGAT
CCGAGTCGAC CAGTTATTGT GGCCATGACA TCAGGAACCG CGGTCGCGAA CGCACATCCG
GCAGTGCTTG AAGCTGACCA CAGCGGATTG CCCCTCATCG TGGTGTCTGC AGACCGACCT
TTTGAGTTGC GTGGCACCGG TGCCAACCAG ACAACGACCC AACCAGGGAT GTTTGGGTGT
GCCGTGCGCT GGTCCACTGA CATACCAGCG TTCGCGGGAG TGGACGGCAT GACACCAGCC
GATGCGCAGG CAACCCGAAA CGCAGTGAAC CGGGCGGTGG CCTACTCGGT GGGGTCGGTT
GGGGGCCCTC GTGGCCCCGT GCACATCAAT GTGGCATTCC GAGACCCGCT TGCCCCATCA
TCTGAGCAAC GTGAGGAACT TGTCCGCCGC GCACAACGTG TGCGCGCCAA CGGGTTAGAC
GGTGGGACTG TGTTTGTGTC CAGTTACCCA CCGAACGATG CCTCCATCAC CGCTGGCCAA
ACAAGAAACA CTGACGTCAC ACATGATGTG ATTGACGGTC TTCGCACCAC CACACGCACG
GTCATCCTCG CGGGTGACAC CGCCCCCACC CAGATCATTG ACATCGCTGA GCGGTATGGG
TGGCCGATCC TCGCTGAACC CTCGTCAGGG GTCAACGGGG CAGCGCCAAC CATTGCTGGT
GGGGCGCTGA TCCTGGCCCG TGCAGGACAC CCCATCAGCA GCGTCTACCG TACGTTGGTC
GAGCAAGTTG AGCACGTTAT TGTTGTGGGG CACCCCACAT TGAGTCGTGA TGCGATTGCG
CTGATGCGTC GCGCCCCACA GCTGACAATC GCACCAGATC ACCGGGTCCA ATGGACAGAC
CCCACGGGGA CAGCAACGGC AGTCATCCCG TTCTCTGTTC TTTCCCCTCA CCTTCGCTCC
GCAACCGCTG TGTCCACCGA CGCCACCTGG CTGTCTCGGT GGCAGCAGGC CGGCAGCGAC
CTGCTCACTC AACTTTCCGA GCAACTGGAC GCACAGGAAC AGTTTTCCGC TCCCGGGCAC
TTAGCGCCAT ACCAGTATGT GCGCGCGCTC GTGGCCAGTG TGACCCCCCA GCACATCCTC
ATGGTGGGGG CGTCCTCGGT GATCCGCGAT ATTGATCGCG TCGCCCCTGT TCCTGCGTGC
GTGCAGGTGT ACGCGAACCG TGGGTTGGCG GGAATTGATG GCACTGTCTC GACAGCGCAG
GGCATCGCCT TGACCTCGCC CGACCGTCAC ACTGTCTTGG TCCTTGGTGA CCTCACTTTC
CTCCACGACA TCAATGGTCT TGTCATTGGC CCAGAAGAGC CCCCCGTGTC GTTGACCATT
GTTGTCCTCA ACGACAACGG TGGGGCGATC TTTGGTGGGC TTGAACATGC CCGCAGCGGC
GACCCAGCCC TGCTGGAACG AGTGTTTGCC ACCCCGCATG GCGCGCGCAT CGACGATCTT
GCCCGCGGGT ACGGGGCCAC CTATCAGCGG GTTAACACAC CAGAAGACCT CGGTGGCATG
CTCACAGTCA AGCCTGCTGG GATTCACGTC GTCGAGGTCG TCACCTCACG GGAAGAACGA
GGAAACCTTG ATGCACTTCT CTCACAGTGA
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| Protein sequence | MAMSAPDLSA ELPTSLSTAW ELITQFVALG GRHVVLSPGS RSAPLAYVAA VAHEAGLLTL
HVRIDERSAA FVALGMAKAD PSRPVIVAMT SGTAVANAHP AVLEADHSGL PLIVVSADRP
FELRGTGANQ TTTQPGMFGC AVRWSTDIPA FAGVDGMTPA DAQATRNAVN RAVAYSVGSV
GGPRGPVHIN VAFRDPLAPS SEQREELVRR AQRVRANGLD GGTVFVSSYP PNDASITAGQ
TRNTDVTHDV IDGLRTTTRT VILAGDTAPT QIIDIAERYG WPILAEPSSG VNGAAPTIAG
GALILARAGH PISSVYRTLV EQVEHVIVVG HPTLSRDAIA LMRRAPQLTI APDHRVQWTD
PTGTATAVIP FSVLSPHLRS ATAVSTDATW LSRWQQAGSD LLTQLSEQLD AQEQFSAPGH
LAPYQYVRAL VASVTPQHIL MVGASSVIRD IDRVAPVPAC VQVYANRGLA GIDGTVSTAQ
GIALTSPDRH TVLVLGDLTF LHDINGLVIG PEEPPVSLTI VVLNDNGGAI FGGLEHARSG
DPALLERVFA TPHGARIDDL ARGYGATYQR VNTPEDLGGM LTVKPAGIHV VEVVTSREER
GNLDALLSQ
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