| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0510 |
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| Symbol | |
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| ID | 8379695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 553756 |
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| End bp | 555126 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645003242 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003160477 |
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| Protein GI | 256831750 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0180422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00320544 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGAAC CGGCGCTCCG AGAGGGTGTG TCCGTGTCAG TGGATCCAAC ACTGTGGGGT
CTGCGCCATG CGCACGACCC CACAGTTGTT CGTGACGACG AAGGTCGCTA CGTCATGGTG
TCCACAGACG CGTGTTCACA AGGTGCAGCA CCCGCAGGAG TTCATGTGCG GGTTTCCGAT
GATTTAGTGA CCTGGAAGTG GGCGGGAACA GCGTTCAACG GAATCCCTGC CAGTGCCCGC
CACCACACGC AAGCTCAAGG GCTTTGGGCT CCTGACCTTG TCCGGTGGCG CGGCGCTGAA
GGAACCGATT CTGCGTGGCG GATGTATTGG TCGGCGTCAT CGTTTGGATC GCGCACCTCC
GCAATCGGGA TGGCCTCTGC ACCTACCCCC CACGGTCCAT GGCACGATGA CGGTGTCGTC
GTCGCTACCG ACCACGAGTA TTCTTCCCAC AACGCTATTG ATGCGTGCGT GATGTGGGAT
AGCAACAGTG TTCCCTGGCT CGCCTATGGT TCCTTTTTCT CGGGTCTGTA TGTGCTCGAA
CTTGACCCGG TCACAGGCCA CCCACGCTAC CCGGGGGCAG TCGGGGAGCG CATCGTTGCT
CGCCCTCGTG TGGTTGAGGG TGCGGTTGAA GGACCATTCC TGCGAGCTGG TGACCCCGCC
TCACGCGGCC AGGTGACCCT GTTTGTCTCG TTCGATTCGC TGTTCAACGC CTACGATGTG
CGGGTCGCGC AAGCCGACCG CGCGCTCGGA CCGTTTCGTG ATCGTGCCGG AAACAGGCTT
TTGGACCGGC GTCTGATGGA CGACACCGCA ACATTGGACC CCACTCAGGT GGGAACCCGC
CTCGTGGTTG GCCATCACTT CCCCGGGCTT CCCACAGTGA TTGCTCCTGG GCATTGCAGT
GTCTTTCGTG ATGATGATGG CTCAGAGTTC TTAGTCCACC ACACCCGGTT CGCCGAGTTC
CCCGGTGAGC ATGAAGCGCA GATCCGCCGC TTGCTCTTCG TACCGTCCGG GTGGCCAGTG
GTCTCGCCGT TGCCGTATCA CGGTGAACCT CGAACCGTTG CTCGTGGTGG CACAGGACCT
GAGGAGTCAG GCACATGGGA AGTGCTGGAT TTGTCCCACC CTGCTCGCAC CGTGCCTGTG
ACCATACCTC ATGGGTTCCC GGACCACTTG CGTCAGGCAC CGGTGGTCGA CTCAGTCACC
GTGGATGTGT CCAGTCTCGG GCTTGGCCCT GTCCTGGCGC TGACAGAGTA TGTCACGTTC
CCGGTCACCA CGCCATCAGG CGATGTGTCT GTGGGGTTTG CCGGGTACCG TGAGGTGGAC
GGAGTACCCG TTCATGTCAG CGGGTTCCGA CAACCTCGCA CGGACGCGTA G
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| Protein sequence | MTEPALREGV SVSVDPTLWG LRHAHDPTVV RDDEGRYVMV STDACSQGAA PAGVHVRVSD
DLVTWKWAGT AFNGIPASAR HHTQAQGLWA PDLVRWRGAE GTDSAWRMYW SASSFGSRTS
AIGMASAPTP HGPWHDDGVV VATDHEYSSH NAIDACVMWD SNSVPWLAYG SFFSGLYVLE
LDPVTGHPRY PGAVGERIVA RPRVVEGAVE GPFLRAGDPA SRGQVTLFVS FDSLFNAYDV
RVAQADRALG PFRDRAGNRL LDRRLMDDTA TLDPTQVGTR LVVGHHFPGL PTVIAPGHCS
VFRDDDGSEF LVHHTRFAEF PGEHEAQIRR LLFVPSGWPV VSPLPYHGEP RTVARGGTGP
EESGTWEVLD LSHPARTVPV TIPHGFPDHL RQAPVVDSVT VDVSSLGLGP VLALTEYVTF
PVTTPSGDVS VGFAGYREVD GVPVHVSGFR QPRTDA
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