Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0495 |
Symbol | |
ID | 8379680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 535317 |
End bp | 536324 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645003227 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003160462 |
Protein GI | 256831735 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.448967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.778992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACGCA CACGCCCTCC GGGGATGAAC GATGTGGCAC GGCTTGCGGG AGTGTCACAT CAAACGGTGT CGCGGGTGTT GAATGATCAT CCGTCGGTGC GACCTGAGAC GCGGGATCGT GTGTTGCAGG CGGTGGCGGA TTTGGGGTAT CGCCGTAATC TTGCTGCACG AGCGTTGGTG ACTCGGCGGA CAGCAACGAT TGGTTTGATT ACGACGGGGT CGTCATTGTT TGGGCCGCAG CGGGCTTTTG TGGCGATTGA AGAGGCTGCC CGTGAGGCGG GCTACATTGT GGCGGTTGCA ACGGTGCGCC AGCCCACGCC GACCTCGATG AATACGTTGT TGGACCATTT GTTATCGCAG AATGTGGAGG GCATTGTCAT TGTCGCTCCA CATAGTCAGG TGTTGGACGC GATTCGGAGT TTTGAGCCGT CGATTCCTGT GGTTGTTCTT GCTGACGCCG CCCATGTGCC TGGTCACATT CACACAGTGT CGTTGGATCA GGTGGAGACG GGGCGTCTTG CGGTGCGGCA TTTGGCGTCA CTGGGGCACG AGCAGATTGC TCACATTTCA GGACCGTTGG ATTGGACGGA TGCGCGGGGC CGGCTTGAGG GGTGGCAGTT GGAGTGTCGT GAGGTGGGTG TGAATCCGGT GCCGTTGATT CAGTCGGACT GGAGCAGTGA GCGTGGTTAT GACATCGGGC GGGATTTTGT GCGGGCTGGG TTACCGACCG CGATTTTTGC TGCCAACGAC ATGATCGCGT TGGGGGTCAT GAGAGCTCTG TATGAGGCAG GGGTTCGGGT TCCAGAAGAT GTGTCCATTG TGGGGGTTGA TGATGTGCCT GGTGCGGCTC ATTTTATTGC GCCCTTGACT ACGATTCATC ATCCGTTTGC GCGGATGGGC AAGGTCATTA TGGAGACGTT GTTGGCTGCC ATTGATGGGC AGGATGTCAC GCCTCAGGTT CTTCCTCCAC AGTTGGTGGT GCGGCACAGC ACTGCATCAC CGCGGTGA
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Protein sequence | MTRTRPPGMN DVARLAGVSH QTVSRVLNDH PSVRPETRDR VLQAVADLGY RRNLAARALV TRRTATIGLI TTGSSLFGPQ RAFVAIEEAA REAGYIVAVA TVRQPTPTSM NTLLDHLLSQ NVEGIVIVAP HSQVLDAIRS FEPSIPVVVL ADAAHVPGHI HTVSLDQVET GRLAVRHLAS LGHEQIAHIS GPLDWTDARG RLEGWQLECR EVGVNPVPLI QSDWSSERGY DIGRDFVRAG LPTAIFAAND MIALGVMRAL YEAGVRVPED VSIVGVDDVP GAAHFIAPLT TIHHPFARMG KVIMETLLAA IDGQDVTPQV LPPQLVVRHS TASPR
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