| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0487 |
|---|
| Symbol | |
|---|
| ID | 8379672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 526833 |
|---|
| End bp | 528581 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645003219 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003160454 |
|---|
| Protein GI | 256831727 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0836475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCCC TGACAGCCAG CACGGCAATG ACGCCCGAAA CCAGAATTCG ATCCCTGGAA
GCATTAAAGG CCACCACACC TGAGGAGCCG TTAGACGTCC TCATCATTGG TGGCGGGGTC
ACCGGTGCAG GGACAGCACT TGACGCAGTC ACCCGTGGGC TCGACACTGC GATCATCGAG
GCACAAGACT GGGCATCGGG GACGTCAAGC CGCTCTTCTA AACTTGTCCA CGGTGGTTTG
CGGTACCTGC AAATGCTGGA CTTCTCTCTT GTTCATGAAG CACTCACTGA ACGAGACCTG
CTCATCAACA AGTTGGCCCC ACACCTGGTC AAACCGGTGC CCTTCTTGTT CCCCCTCATC
AAACAGTACG AGCGCCCCTA CATTGGCGCG GGCATCATGC TCTATGACAT TCTTGCCTCG
CTTGCCCCAG GGAAACGGGC GATGCCGTTC CACCGGCACC ACGGCCGCAA ATCCATGGAA
CGCCGCTTTC CCTCGCTGCG TCACGACGCT GCTGTTGGAG CGATCGAGTA CTACGACGGG
TCCGTCGACG ACGCACGTCT TGTCCTCACC CTCACCCGCA CTGCCGTGTC CTACGGTGCT
CACGCCTGCT CCCGGACTCA AGTTGTTGAA CTGACCAAAT CACCGGCTGG CCGAGTCAAC
GGCGCAGTTC TTAAAGACCT TGAAACCGGC GACACTTTCA CCGTGCATGC ACGGCATGTC
ATCAACTCCA CCGGTGTGTG GACCGAGGAA ACAGAAGCAC TGGCCGGTGG CACCGGCGGC
CTGAAGGTCC TTGCGTCCAA GGGCATCCAC ATTGTGGTGC CCCGTGACCG AATCAAGGGC
AACGCGGGCC TGATTTTGCA AACCGAAAAG TCAGTTCTCT TTGTGATCCC CTGGTCACGG
TACTGGGTGA TCGGAACCAC CGACACCCCG TGGGAGCACG ACCTTCAACA CCCGGTCGCC
ACCGCAGAAG ACATCGACTA CGTCCTGGAT CATGCCAACG CGGTCCTGCA AGACCCATTG
ACCCGGGACG ACATCATCGG GACCTGGGCT GGGTTACGGC CTCTGCTGCA ACCAGGGACC
AAAGAGGGCA CCTCATCGGC AAAGGTTTCG CGTGAGCACA CAGTTGCTTC CCCAAACCCA
GGATTCACCG TGATCGCGGG TGGGAAACTC ACCACCTACC GGGTCATGGC AGAAGACGCG
GTGGACTTTG CCCTTGGCCC AGAAGCATCC GCACGCCCAT CAGTCACCAA CAACATCCCC
CTGCTTGGTG CAGTGGGGTT GGCAGCCATG ACCAATCAAG CCAAGGCACT GTCCAAGCGT
TTTGGCTGGT CGAAGCAGAT GATCGCCCAC CTGCTTCACC GCTACGGCTC GATGATCAAC
GAAATCGCTG CGGCCTGTGG CCAAGACCCT TCGCTGGCAG AACCCCTCAC GCACGCAGAT
GCCTACTTGC GAGCCGAAAT TTGGTATGCG GCGCACAACG AGGGTGTCAT TCACCTTGAG
GATGTCATGC TGCACCGAAC CCGCATCATC TATGAGTACG CGGATAAGGG GCGGGCCGCA
ATCGACGAGA TCACCGAGAT CGTCGGCGAG GCCCTTGGGT GGGACGAGGA CCGTCGCGCC
CAAGAAAAGC GGTCCTACCT GGAACGCATC GACGCTGAAG AAGCCGCTGA ACAAGAACTC
GACGATGCTG CGGCAGAAAA GGTGCGGTTG CGCGCCACTG AGATCGCCCC GATGGAGCGA
CTCGCCTAA
|
|---|
| Protein sequence | MSALTASTAM TPETRIRSLE ALKATTPEEP LDVLIIGGGV TGAGTALDAV TRGLDTAIIE
AQDWASGTSS RSSKLVHGGL RYLQMLDFSL VHEALTERDL LINKLAPHLV KPVPFLFPLI
KQYERPYIGA GIMLYDILAS LAPGKRAMPF HRHHGRKSME RRFPSLRHDA AVGAIEYYDG
SVDDARLVLT LTRTAVSYGA HACSRTQVVE LTKSPAGRVN GAVLKDLETG DTFTVHARHV
INSTGVWTEE TEALAGGTGG LKVLASKGIH IVVPRDRIKG NAGLILQTEK SVLFVIPWSR
YWVIGTTDTP WEHDLQHPVA TAEDIDYVLD HANAVLQDPL TRDDIIGTWA GLRPLLQPGT
KEGTSSAKVS REHTVASPNP GFTVIAGGKL TTYRVMAEDA VDFALGPEAS ARPSVTNNIP
LLGAVGLAAM TNQAKALSKR FGWSKQMIAH LLHRYGSMIN EIAAACGQDP SLAEPLTHAD
AYLRAEIWYA AHNEGVIHLE DVMLHRTRII YEYADKGRAA IDEITEIVGE ALGWDEDRRA
QEKRSYLERI DAEEAAEQEL DDAAAEKVRL RATEIAPMER LA
|
|---|
| |