Gene Jden_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0485 
Symbol 
ID8379670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp524430 
End bp525947 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content56% 
IMG OID645003217 
Productglycerol kinase 
Protein accessionYP_003160452 
Protein GI256831725 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.361575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA AATTTGTTCT TGCCATCGAC CAAGGAACAA CAAGCTCCCG CGCAATTTTG 
TTCACCCATC AGGGCACGAT CCACTCGGTT GGCCAGTTGG AGCACGACCA GATCTTCCCG
CAAGCAGGGT GGGTAGAGCA CAACGCCGAC CAAATTTGGA ACAACGTGCG CGAAGTGGTG
GGCCTTGCTC TCACTCGCGG GAACGCCACC TACGATGATG TCGCTGCTGT AGGGATCACC
AACCAACGTG AAACAGCTGT GGTGTGGGAC AAAAACACCG GGAAACCGGT GTACAACGCC
ATTGTGTGGC AAGACACTCG CACCCAAAAA ATTGTTGACG AACTCGGTGG GGACGAAGGC
GCAGACCGGT ACAAGAAACT CACCGGTTTG CCTTTGGCTA CCTACTTCTC TGGGCCAAAG
GTCAAGTGGA TCCTCGACAA TGTTGATGGT GCCCGGGAAG CAGCGGACAA GGGTGACCTG
TTGTTTGGGA CCACTGACTC GTGGGTGCTG TGGAACATGA CGGGTGGCCC CAACGGTGGT
GTCCACGTCA CCGATGTCAC CAACGCGTCG CGTACACTGT TGATGAACAT TGAAACCCTG
CAGTGGGATG AATCCATGGC CGAGGTCATG GGGATCCCGA TGTCCATGCT CCCGGAAATT
AAGTCATCCT CCGAGGTGTA TGGGCACGGT CGTAAGCAGG GGCTGGTTCC TGGTGTGCCC
ATCTCGGGGA TTCTGGGTGA CCAGCAGGCT GCCACGTTTG GGCAGGCGTG TTTTGAGGTA
GGCACCGCGA AGAACACGTA CGGTACTGGC AACTTCATGC TCATGAACAC AGGTACCGAA
CCGATCCACT CGAAGAATGG TCTGCTCACC ACGGTGTGCT ACAAGATTGG TGACCAGCCC
GCCGTGTACG CCTTGGAAGG CTCCATTGCG GTCACTGGGT CATTGATTCA GTGGTTGCGG
GACAACTTGG GTCTGTTTGA AGATGCCCAA GATGTGGAGT ACTTGGCACG CAAGGTTGAT
GACAATGGCG GCGCCTATGT GGTTCCTGCG TTCTCTGGTT TGTTTGCGCC CTACTGGCGT
TCCGATGCGC GTGGCGCGAT TGTGGGTCTA ACCCGCTACG TGAATAAGAA CCACATTGCC
CGTGCAGCTC TTGAGTCGGT GGCATTCCAG ACCCGTGAGG TCGTTGATGC CATGAACGCT
GATTCTGGTG TGGCGTTGAC TGAGCTCAAA GTGGACGGCG GCATGGTCGC TAATGAACTG
CTCATGCAGT TCATTAGCGA CCAGCTTGAT GTGGAGGTTA TTCGACCTGA GGTCGCGGAA
ACTACCGCAC TTGGTGCCGC CTACGCGGCT GGTATTGCGG TGGGTTTCTG GAATGGGGAA
GACGACGTCC GCAACAACTG GAAGGAAGGC AAACGCTGGG CCCCTGCTGA GAAGCAGTCC
GAACGTGAGC GTCAGTACCG GTTGTGGAAG AAAGCTGTAA CAAAGACGTT CGACTGGGTT
GATGACGACG TGAAGTAG
 
Protein sequence
MTKKFVLAID QGTTSSRAIL FTHQGTIHSV GQLEHDQIFP QAGWVEHNAD QIWNNVREVV 
GLALTRGNAT YDDVAAVGIT NQRETAVVWD KNTGKPVYNA IVWQDTRTQK IVDELGGDEG
ADRYKKLTGL PLATYFSGPK VKWILDNVDG AREAADKGDL LFGTTDSWVL WNMTGGPNGG
VHVTDVTNAS RTLLMNIETL QWDESMAEVM GIPMSMLPEI KSSSEVYGHG RKQGLVPGVP
ISGILGDQQA ATFGQACFEV GTAKNTYGTG NFMLMNTGTE PIHSKNGLLT TVCYKIGDQP
AVYALEGSIA VTGSLIQWLR DNLGLFEDAQ DVEYLARKVD DNGGAYVVPA FSGLFAPYWR
SDARGAIVGL TRYVNKNHIA RAALESVAFQ TREVVDAMNA DSGVALTELK VDGGMVANEL
LMQFISDQLD VEVIRPEVAE TTALGAAYAA GIAVGFWNGE DDVRNNWKEG KRWAPAEKQS
ERERQYRLWK KAVTKTFDWV DDDVK