| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0445 |
|---|
| Symbol | |
|---|
| ID | 8379631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 468494 |
|---|
| End bp | 469603 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645003178 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003160413 |
|---|
| Protein GI | 256831686 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4129] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.379085 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAACAA CACCACGTGA CCGCCTCCAC CAGCGCGCCT ACCTCTGGGC GCGCCGCGGT
TGGGCGCGCG TCACCCGAGC CGCATGGCCC ACCACAACAG CCGCCATCGC TTGTGGTCTT
TCCTACTGGG CTGGACAACA CGTCGTCGGA CACCCCTACC CGTTCTTCGC GCCCGTCGCC
GCCTGGGCAT CCCTTGGATA TACAGCAGAC CGGTCAGTGC GGAAGGTCGC CGAAACCGGG
ATCGGTGTCT CCATCGGCGT GTGGCTCGGC GACCTCTTTG CCCACGCAGT GGGTTCCGGC
CCCTGGCAAG TTGCTGTCAT CGTGTTCATC GCCGTGCTCA TCGCACGATT TGTTGGCTCA
GGTTCCCCCC TTGCCACCCA TGCCGGAACC CAAGCAGTCG TCCTTGTCGG ACTACCCATC
GGAGTGCTCA GCCCCGCCCT CGGCGGCGGA TTCGGACGCT GGTCCGACGC CCTCGTCGGC
GCCGCAGTCG CCACCCTCAT CGCCGCGATC ATTCCCAACA ACCCGGTGAG GCGCGTCCGC
TCCGCCGCTC AACTCGCCAC CACGGAACTC GCCGAAACCC TCACCCACAT CGCCGCTGCC
GTCACCAGCG GAACCCAAGA AGACCGGGAC TACGCCATCA ACCGGGCCCG CTCCACCCAA
GTGCCCCTCA ACGACTGGGC CGCCATCAGC GCAGTCGCCC TCAACGCCAC CCGCATCAAT
GCAACCGCCC GGCGCTACCG TAGCCACATC GCCGAACTCG ACACCCAACG CGTCCTTGTG
GACCGCGCCA TCCGATCAAC CCGAGTCGTC GCCCGCCGCG CCCAAACACT GCACCCCGGA
CCCGGCGCTG ACGACGTCGC CGAACTCCTC ACCGCCACCG CAACCGCCAC CCGAGAACTC
GCACACGCCA TCGGCCACGG CAAAGACCTC GCCGTGGCCC GCGAATACCT CACCACCGTG
GCCCAACAAG CAGCCCCCGG CGCACTCGGT GAACGAGACT GGCAAGCACA AGCACTCATT
TTAGTGTTGC GCTCCGCCAT CGTAGACTTG CTTGAAGCCG CAGGGGCCAG CGAACAAGAA
GCCCGCGACG CCCTCGCCGC TTTAACCTGA
|
|---|
| Protein sequence | MSTTPRDRLH QRAYLWARRG WARVTRAAWP TTTAAIACGL SYWAGQHVVG HPYPFFAPVA
AWASLGYTAD RSVRKVAETG IGVSIGVWLG DLFAHAVGSG PWQVAVIVFI AVLIARFVGS
GSPLATHAGT QAVVLVGLPI GVLSPALGGG FGRWSDALVG AAVATLIAAI IPNNPVRRVR
SAAQLATTEL AETLTHIAAA VTSGTQEDRD YAINRARSTQ VPLNDWAAIS AVALNATRIN
ATARRYRSHI AELDTQRVLV DRAIRSTRVV ARRAQTLHPG PGADDVAELL TATATATREL
AHAIGHGKDL AVAREYLTTV AQQAAPGALG ERDWQAQALI LVLRSAIVDL LEAAGASEQE
ARDALAALT
|
|---|
| |