| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0419 |
|---|
| Symbol | |
|---|
| ID | 8379605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 443175 |
|---|
| End bp | 444449 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645003150 |
|---|
| Product | aspartate kinase |
|---|
| Protein accession | YP_003160387 |
|---|
| Protein GI | 256831660 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.736746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCATTAA TTGTCCAAAA ATATGGCGGA TCGTCCGTTG GAGATGCTGA GAGCATCAAA
CGGGTTGCGA AACGCGTCGC TGAAGCTAAA AGAGCCGGGA ATGACGTTGT TGTTGTGGTC
TCTGCTATGG GCGACACCAC CGACGAACTC ATTGACCTTG CGCAGCAAGT GACCCCCATG
CCCCCGCAAC GTGAAATGGA TATCCTCCTC ACCGCTGGTG AGCGCATTTC GATGTCGTTG
TTGGCGATGG CGATTAACAA TTTGGGGGTG AAAGCGAAAT CGTTCACCGG GCAGCAAGCG
GGTGTGATTA CTGATGCTGT GTATGGGCGG GCCCGAATTG TTGATGTGGT CCCCTCGCGG
GTCCGGGAAA CCCTCGATAA AGGAACTGTG GCTATTGTTG CCGGGTTCCA GGGGGTGAAT
CGAGACGAAA ACGATGTGAC CACATTGGGG CGTGGTGGGT CTGACACTAC GGCCGTTGCG
CTGGCTGCGG GTCTGGGCGC GGATGTGTGT GAAATCTACA CCGACGTCGA TGGCGTGTTC
ACCGCTGACC CTCGCATTGT GCCTAAAGCG CGCAAAGTGG AGCGCATCAC CTACGAGGAG
ATGTTGGAGA TGGCTGCATG CGGCGCGAAA GTGCTCATGC TGCGCTGCGT GGAGTTTGGT
CGGCGTTGCT CCGTGCCCAT CCACGTGCGC TCCTCCTTCA CCGGCCAAGT CGGCACACTC
GTCACCAACG AACCCCCAGC AAAAGAGGCA TCAACTGTGG AAGCTCCCAT CATCACCGGC
GTTGCGCACG ACCGGTCCGA AGCGAAAATC ACCATCGTCG GCGTCCCTGA CGTCCCGGGC
ACAGCGGCCC GCATTTTTGA AGTGGTTGCA CTGTCTGGCG CGAACATTGA CATGATTGTC
CAAAACGTGT CAGCCGCAGC AACTGGGCTC ACTGACATTT CCTTCACGTT GCCGGAGGGG
GACGGTCCAG CTGCACTGGC AGCGTTGCGC GCGTCGCAAG AAGACATTGG GTTTGACTCG
TTGCAGTTTG ATGACCAAGT GGGCAAATTG TCGCTCATTG GGGCGGGCAT GAAGTCCAGC
CCGGGTGTGT CTGCGCAACT GTTTGCTGCG TTGCGTGACG CGGGAATCAA CATTGAAATG
ATTTCCACGT CCGAGATTCG CATTTCCGTG GTGACCAGAG AAGATTCCCT CAACGATGCT
GTTCGCGCAG TCCATTCAGC GTTCAACCTT GACGTTGAAG CTGATGCCAT TATCCACGCC
GGTACCGGCC GCTAA
|
|---|
| Protein sequence | MALIVQKYGG SSVGDAESIK RVAKRVAEAK RAGNDVVVVV SAMGDTTDEL IDLAQQVTPM
PPQREMDILL TAGERISMSL LAMAINNLGV KAKSFTGQQA GVITDAVYGR ARIVDVVPSR
VRETLDKGTV AIVAGFQGVN RDENDVTTLG RGGSDTTAVA LAAGLGADVC EIYTDVDGVF
TADPRIVPKA RKVERITYEE MLEMAACGAK VLMLRCVEFG RRCSVPIHVR SSFTGQVGTL
VTNEPPAKEA STVEAPIITG VAHDRSEAKI TIVGVPDVPG TAARIFEVVA LSGANIDMIV
QNVSAAATGL TDISFTLPEG DGPAALAALR ASQEDIGFDS LQFDDQVGKL SLIGAGMKSS
PGVSAQLFAA LRDAGINIEM ISTSEIRISV VTREDSLNDA VRAVHSAFNL DVEADAIIHA
GTGR
|
|---|
| |