| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0388 |
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| Symbol | |
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| ID | 8379577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 410710 |
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| End bp | 412308 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003121 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003160359 |
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| Protein GI | 256831632 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCT TGCCCGCAAC TGATGCGTCC GCATCAGAAC CTCAATTGGT GCTCACTCAA
CGAACCGTGT GGGTCATTTT TGCTGCGCTG ATGTCAGCAA TGTTTTTGTC CTCGCTTGAT
CAAACGATCG TGTCCACGGC GCAACCCACC ATTGTGGGTG AGCTCGGTGG AGTGGCCAAT
CAAGCGTGGA TCACCACCGC GTATTTGCTG GCCACAACCA TTGTGATGCC GATCTATGGC
AAGTTTGGTG ACCGTCTTGG TCGGCGTAAC CTGTTCCTTG CTGCCATCGC GATTTTCACG
CTCGCATCCT TAGGGTGCGC ATTGTCGGAA ACGTTCTGGC AGTTTGTGGT GTTCCGTGCC
ATCCAAGGTC TTGGTGGCGG TGGGTTGATG ATTCTGTCGC AGGCGATCAT CGCGGACATC
ACCCCCGCTT CTGAGCGGGG AAAGTACATG GGTCCGATGG GCGCAGTGTT TGGGATCGCT
GCTGTTGCTG GTCCGTTGCT CGGCGGTTTC TTTGTTGACC ACCTCACGTG GCAGTGGGCC
TTTTGGATTA ATTTGCCTAT TGGCGCTGCA GCTTTTGTTG TGGCGTTCAA GTTGTTGCGC
CTTCCCTCCC ACAAGACAAC AACACCTGTT GATGTGCTGG GTGTGGTGTT GCTGTCAATC
GCGACCACGT GCTTGATTTT CTTCACCGAA TTTGGGGCAG ACCGTGACCA CGGGTGGAGT
GACCCACTGA CTTTGCTGTT CCTTGCTGGT CTCCTCGCGG CTGCGGTGGG TTTTGTCCTG
ACAGAGCGAC GTGCCGCTGA CCCCATTATT CCGCTCTCCC TGTTCCGCAA CCGGGTGTTT
GTCACGGCCA CGTCCATCGG TTTCGTCTTG GGTCTGGGCA TGTTCGCGGC CTTGGCGTTT
TTGCCAACGT TCTTGCAAAT GTCGTCGGGT ACCTCAGCTG CGGTCTCGGG GCTCCTGATG
ATCCCCATGA TGGTGGGAAT GATGGGAACA TCCATCGCTT CAGGTCTTGC GATCACTCGA
ACGGGTCGGT ACAAGAAGTA TCCGATCGCC GGGACGATCC TCACCCTGAC TGTCATGGTG
ACCATGTCCA CCCTTCAGGG TGACACTCCC CTGTGGCTGA TTTGCGTGTA CTTGTTCTTC
TTTGGTGCTG GCCTTGGGCT CGTCATGCAG GTTGTTGTTC TTGTCGTCCA AAACGCTGTG
GGGCCACATG CGGTGGGGAC CGCCACATCG ACGAACAACT ACTTCCGTGA AGTGGGGGCT
GCACTAGGTG TTGCAGTGTT CGGGTCCTGG TTTACCAACC GCCTTGCAGA CAACCTCGGC
AAGGTGTTCC TCACCGCCGG GTACACCCCG TCGGAAGCAG GAGAACTGGG AGCCTCTATC
CGCCCCGAGT TGATGAACCA GCTTCCCGAT GCGGTCCGTC AGGGAATCAT TGATGGGTAC
GCCGATGCGC TGGCTCCGGT GTTCCTGTAC ATGGCACCTT TCATCGTCGC GGCGATCGTG
CTCGCTGTTC TCCTTCCTGA GATCAAGCTT TCTGACGAGG CAGGTCTTGT TGCTCGCGGT
GAAGCAGTTG ACGGCCGCGT CACAGCATCA ACACACTGA
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| Protein sequence | MSSLPATDAS ASEPQLVLTQ RTVWVIFAAL MSAMFLSSLD QTIVSTAQPT IVGELGGVAN
QAWITTAYLL ATTIVMPIYG KFGDRLGRRN LFLAAIAIFT LASLGCALSE TFWQFVVFRA
IQGLGGGGLM ILSQAIIADI TPASERGKYM GPMGAVFGIA AVAGPLLGGF FVDHLTWQWA
FWINLPIGAA AFVVAFKLLR LPSHKTTTPV DVLGVVLLSI ATTCLIFFTE FGADRDHGWS
DPLTLLFLAG LLAAAVGFVL TERRAADPII PLSLFRNRVF VTATSIGFVL GLGMFAALAF
LPTFLQMSSG TSAAVSGLLM IPMMVGMMGT SIASGLAITR TGRYKKYPIA GTILTLTVMV
TMSTLQGDTP LWLICVYLFF FGAGLGLVMQ VVVLVVQNAV GPHAVGTATS TNNYFREVGA
ALGVAVFGSW FTNRLADNLG KVFLTAGYTP SEAGELGASI RPELMNQLPD AVRQGIIDGY
ADALAPVFLY MAPFIVAAIV LAVLLPEIKL SDEAGLVARG EAVDGRVTAS TH
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