Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0314 |
Symbol | |
ID | 8379507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 334655 |
End bp | 335746 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645003050 |
Product | ABC transporter, periplasmic binding protein, thiB subfamily |
Protein accession | YP_003160289 |
Protein GI | 256831562 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000495948 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00896596 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCACC ACACCGCCAC CCACACACAG GCCACCCGCC GCCCACTTAC CACAACCCTC ACCGCCCTCA CCCTCACCGC CGCGCTCGCC GGGTGCGTGC CAGGGTCCTC AAACGAAGAC AACGCCCAGG GGGAAACCCC CTCGACTGTG ACCGTCGTTG TTCACGACTC ATTCCAGATG AGTGAAGAAC AGCAGGCCGA CTTCGAAAAA ACCAGCGGAT ACGACCTCAC CATTGTCACC AACGGTGACG GGGGAGCCTT AGTGAACTCC CTGATCCTCA CCAAGGACGC CCCCATTGCC GATGCGGTTT TTGGTGTCGA CAACACGTTT GCCTCCCGTG GCATCAGTGA AGAGGTGTTC GCCCCCTACA CCTCCGAGGT CGCCTCCCAA ACAAGCCGTG ACCTGGCCCT TCCTGGTGAT GACACGTTAA CGGCCATTGA CTTTGGGGAC GTGTGCCTCA ACGTGGACCC CACCTGGTTC GAGAACCACT CCCTTGACGT CCCAGCAACC CTGGACGACC TAGCCGACCC CGCCTACCGC AACCTCACCG TGGTCACCAA CCCGGCGACC TCCTCACCAG GGTTGTCGTT CCTGTTCGCC ACAATCGGGA AATACGGGGA AGACGGGTAC CTAGACTACT GGACCCAACT CAAAGACAAC GGCCTTAAAA TTGTGGACGG TTGGGAAGAC GCCTACTACG TGGACTTCAC CGCAACCGGT GACGGAGACC GCCCCATTGC GTTGTCCTAC GCATCATCCC CAGCGTTCAC TGTCACCGAC GACGGGTCCG CAACCACCAC ATCGGCTCTC CTGGACACCT GCTTCCGGCA AGTCGAATAC GCCGGGGTCC TGCACGGGGC CGCAAACCCT GAGGGCGCGC AAGCATTCAT TGACTACCTC CTCAGCGAGG ACTACCAAAC CACCATCCCC GACGCCATGT ACATGTACCC CGTCGCGGAC ACCGTGGAAC TTCCCGATGC GTGGGCCCAG TTCGCCCCCG TCCCCACCAC CCCAATCTCC CTAGACCCAG ACACCATCGC GCGCATGCGT GACACCTGGA TCAAAGACTG GAGCGCACAG ATCATTGGCT AA
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Protein sequence | MNHHTATHTQ ATRRPLTTTL TALTLTAALA GCVPGSSNED NAQGETPSTV TVVVHDSFQM SEEQQADFEK TSGYDLTIVT NGDGGALVNS LILTKDAPIA DAVFGVDNTF ASRGISEEVF APYTSEVASQ TSRDLALPGD DTLTAIDFGD VCLNVDPTWF ENHSLDVPAT LDDLADPAYR NLTVVTNPAT SSPGLSFLFA TIGKYGEDGY LDYWTQLKDN GLKIVDGWED AYYVDFTATG DGDRPIALSY ASSPAFTVTD DGSATTTSAL LDTCFRQVEY AGVLHGAANP EGAQAFIDYL LSEDYQTTIP DAMYMYPVAD TVELPDAWAQ FAPVPTTPIS LDPDTIARMR DTWIKDWSAQ IIG
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