| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0292 |
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| Symbol | |
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| ID | 8379486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 313832 |
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| End bp | 315373 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003028 |
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| Product | BCCT transporter |
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| Protein accession | YP_003160268 |
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| Protein GI | 256831541 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0419043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAACGG TAGAACAATG GCGAAATAGC AAGGTCGCAA AGCTAGCGAC AATCCCCCGC
ATACCAGCCC GGGAAAAGAC CGGGGTGTCA TTCCCCACAA ACTGGTCCGT CTTTGTGATT
GCGATCGCAG CCACCGCCTC AGTTCTCATC TGGGCAAACA TCGCCCCAGA CACAATCTCC
ACCACCGGTG GAGCAATCGC CTACAGCTCC TACCGCCGTG GCCGCGCCCC ATTAATTTCC
GCCCTGTTTG AACCCGTGTT CCCCAACGCA TCCAACCGGT TCGCCGGGCG CCTCATTGAC
GTGTTCGCGA TCATTGTGAC CCTCTTTGGA ACCGCGATCT CCCTCGGCAT TGGAGCGCTC
CAAATCCAAT CCGGATTCAC ACTCGTGTCC GGTTTCAGCC CCGAAGGCAA CATGTTCCTC
ATCGGGGCGC TCGCTGTTCT CACCTCACTG TTCATCGCAT CGGCAGTGTC CGGTGTGAAA
AAAGGTATCC GCGCACTGTC CAACATCAAT ATGGGGCTGA CCATCGCGCT GGCACTGTTC
ATGCTCATCG CCGGGCCAAC GGTGTTCCTG CTCAACCTCG TTCCCGCATC AGTGTTCTCG
TTCTTCACCG AACTCGGTCT CATGCTGACC CGTAACCCCA ACCAAGGACA AGAAGCACAC
GACTTCCTTT CCGCATGGAC CACGTTCTAC TGGGCGTGGT GGGTGTCGTG GACCCCATTC
GTGAGGATGT TCATTGCAAA AATTTCCCGC GGGCGTACCT TGCGTCAATA CGTGACGACA
GTCGTGCTCG TCCCTGCTGC GATTTCCATG GTGTGGTTTG CCATTTACGG TGGGACAGCA
ATCTCCATGA CACTTGACGG CAACGAACTC ATGACCGGTG GTTCCGGTGA GGAAGTGCTG
TTCAACATGT TGAGTAACCT GCCCTTTGGG TTGCTCACCT CAATCATCGC CATGATCGCG
ATCATCATTT TCTTCATCAC TGCAGCGGAT TCCGCGTCCA TTGTGATGGC ATCGATGTCG
CAATCGGGCC GCCCCAACCC GTCAAAACCG GTGACCATCA CGTGGGGTTT GCTTCTCGGG
CTTATCGCCA CCTCGTTACT GCTTGCGGGG GGAAATAACG CACTGTCCGG GCTGCAATCC
ATCATGGTGG TCACCGCGCT ACCGTTCGCA TTCGTCACGA TCGGTGTGAT GATTACGTGG
GCCAAAGATC TGCGCACCGA CCCGTTCATT ATTCGACGCA CCTACGCCCA AGAAGCCATC
GCACAAGGTG TGCGGCGTGG GATCGACGAG CATGGTGACG CGTTCGTGTT CTCCGTCAAC
GAGGTTCCTG AGGCCGAAGG GGCCGGAGCG AACTTCCCCT CAGATGACCC GGCCCTCACC
GAGTGGTACG TGGAAGCAAC CGCGGACGCA GACCCCGACT CCTCCGTTCT CACCGAGTCA
GGGCCTCATG TGCCGGTGTC CCCCAGTACC GCACCGGGGA ACACTGCCCC CAGTGCTGCT
ACTGCCGATG CGTCCAGCCC AGCTAGGCGG GCACCACGCT GA
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| Protein sequence | MVTVEQWRNS KVAKLATIPR IPAREKTGVS FPTNWSVFVI AIAATASVLI WANIAPDTIS
TTGGAIAYSS YRRGRAPLIS ALFEPVFPNA SNRFAGRLID VFAIIVTLFG TAISLGIGAL
QIQSGFTLVS GFSPEGNMFL IGALAVLTSL FIASAVSGVK KGIRALSNIN MGLTIALALF
MLIAGPTVFL LNLVPASVFS FFTELGLMLT RNPNQGQEAH DFLSAWTTFY WAWWVSWTPF
VRMFIAKISR GRTLRQYVTT VVLVPAAISM VWFAIYGGTA ISMTLDGNEL MTGGSGEEVL
FNMLSNLPFG LLTSIIAMIA IIIFFITAAD SASIVMASMS QSGRPNPSKP VTITWGLLLG
LIATSLLLAG GNNALSGLQS IMVVTALPFA FVTIGVMITW AKDLRTDPFI IRRTYAQEAI
AQGVRRGIDE HGDAFVFSVN EVPEAEGAGA NFPSDDPALT EWYVEATADA DPDSSVLTES
GPHVPVSPST APGNTAPSAA TADASSPARR APR
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