Gene Jden_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0260 
Symbol 
ID8379455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp276965 
End bp277786 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content62% 
IMG OID645002994 
Productglycosyl transferase family 2 
Protein accessionYP_003160237 
Protein GI256831510 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.306809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.712495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGGTA TGCAGCCGAC TGAACCAAGC AACGCGGAGC CCACTGCGGC GCGTACCCGC 
CGCGCCAAAT CCCAATCGTC CCAAGCTGAT GAACGCGACC TTCAACGCCA ACGTGTTGCC
GTTGTCATCC CCGCGAAAGA CGAAGCTCGA CGCATTGCCC AAACAGTCCG TGCAGCCAAA
GCCATCCCGC ACGTTGATCT TGTCCTCGTG GTTGACGACG GAAGCGAAGA CAACACCCAA
GACGTTGCCC GTGACGCAGG GGCCGTGGTA GTCCGCCACT CCCACAACCG CGGAAAAGCC
GCAGCAATGG AAACGGGGGC TGCTGTTGTC GCGATGCGTG ATGCACCAGG GCGCCTACCA
CGCTTACTCC TTTTCATTGA TGGTGACCTC GCAGAAACAG CCGTGAACAC GGCACCGCTG
ATCGACCCCG TCCTCACTGG GAACGCGGAC CTTGCCATCG CGTTGCTCCC CCCACAGCCG
GGTGCAGGCG GGCGCGGCTT CGTGGTCGGT GCCGCACGCA AAGCCATCAG TTCCCTGACC
GGGTGGGCCC CCACCCAACC TCTGTCCGGT ATGCGCTGCC TGACCCGAGA AGCATTCGAA
GCAGCCACCC CACTCGCTCG CGGTTGGGGT GTTGAAACCG GGATGACCAT TGACCTCCTC
AGCCAAGGGT ATGTGGCCGT GGAAGTGCCG TGCGACCTCA AACACCGCCC CTCCGGTAAA
GACTGGAAAG GTCAACTTCA CCGAGCCGCG CAGTACCGAG ACGTGAAAAT GGCGATTGGC
GCACGCAGGC TTCGGCGGGT GGGTGCACAG AAGAAGAACT AG
 
Protein sequence
MSGMQPTEPS NAEPTAARTR RAKSQSSQAD ERDLQRQRVA VVIPAKDEAR RIAQTVRAAK 
AIPHVDLVLV VDDGSEDNTQ DVARDAGAVV VRHSHNRGKA AAMETGAAVV AMRDAPGRLP
RLLLFIDGDL AETAVNTAPL IDPVLTGNAD LAIALLPPQP GAGGRGFVVG AARKAISSLT
GWAPTQPLSG MRCLTREAFE AATPLARGWG VETGMTIDLL SQGYVAVEVP CDLKHRPSGK
DWKGQLHRAA QYRDVKMAIG ARRLRRVGAQ KKN