Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0242 |
Symbol | |
ID | 8379437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 260564 |
End bp | 261514 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645002976 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003160219 |
Protein GI | 256831492 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.544656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCACCC ACGCCACCAC AACCGCCTGG GTGATCGCCC GATACCTCGG CAACGCCGTA ACAACCCTCC TCGGTGCGAT CACCCTGGCA TTTGTTGTCC TCACTGCCGT GCCCGGCGAC CCCGTTGACG TGATGCTTGG CCCTCTGTCC TCAGCAACCC CCGAAGCCCG CGCCACCATC CGCGCTGACC TCGGACTCGA CCAACCCCTC CACATCCAAT ACCTCACCTA CATCAGCCGT GTGCTCACCG GCGACCTGGG GATGTCCTAC CAACAACACC GACCCGTGGT TGCCATCATC ACCGAACAAC TCGGTGCCAC CCTCGCCCTC GCCGCCGCAG CCCTCGCCCT CGCCGCCCTC GTCGTATTCG CGGCAGCGTT TGTCACCCGA CGAGGCTGGA TGCGACGCAT CGCCGACACC AGCGAACTCC TCGCCGTGTC CGCACCAGTG TTTTGGACCT CCCTCATCCT GGCATCAGTG TTCTCCTACC AACTCGGGTG GTTTCCCATC GTGGGAGGAA CCGACGCTCA ACGCCTCATC CTCCCCGCCG TTGCCCTCGC CCTCCCCCTC GCCGGAGTGA TGGCTCAAAT CCTGCGAACC GGCCTCGATA CCGCCGCCAC CCAACCCTTC GCACTGACCG CCCTCGCGCG AGGCGCATCA CCTCACCACC TCACCCGACA CCACCTCATG CGCCACGGGT TCGCCGCCAC CCTCACCATC ACCGGGTACA TTGTGGGCAC GCTCATCGGT GGGGCCGTCA TCGTGGAAAC GATCTTCGCC CGCGGCGGAA TAGGCAGGGT CACCCTCGAC GCAATCAGCG GCCGCGACCT GCCTGTCATC ATGGGCGTCG TCATCCTCAG CGGAGTGGCG TTCATCGCCA TCAACACCAT GGTCGACATC ATCGCCCGTA TTGTTGACCC CCGCCTCCGT GCCCGGTCCG CCAATGCGTA A
|
Protein sequence | MRTHATTTAW VIARYLGNAV TTLLGAITLA FVVLTAVPGD PVDVMLGPLS SATPEARATI RADLGLDQPL HIQYLTYISR VLTGDLGMSY QQHRPVVAII TEQLGATLAL AAAALALAAL VVFAAAFVTR RGWMRRIADT SELLAVSAPV FWTSLILASV FSYQLGWFPI VGGTDAQRLI LPAVALALPL AGVMAQILRT GLDTAATQPF ALTALARGAS PHHLTRHHLM RHGFAATLTI TGYIVGTLIG GAVIVETIFA RGGIGRVTLD AISGRDLPVI MGVVILSGVA FIAINTMVDI IARIVDPRLR ARSANA
|
| |