| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0241 |
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| Symbol | |
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| ID | 8379436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 258903 |
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| End bp | 260558 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645002975 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003160218 |
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| Protein GI | 256831491 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.161576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCC GCCGTGCCCG ACTGATCCCC GCCGCCACCA TCCTTGTTGG TGCCCTTCTC
GCCGCCACCG GGTGCGCGGC TGATGCGCCC CCCGTCGAAC GTGACGTCGT GTTCGCGATC
GCCGGTGGCA ACCTCGAAAA CGGGCACATG GACCCGCACT CCAGCCAACT TGACGTGTCC
GCCTACGTGC AACGCAACGT CTTCGATTCC CTTCTCGCGC TGGACCCCGA CACCGGAGAG
TTTGTGCCCT GGCTCGCCAC CGCCTGGGAC ATTTCCGAGG ACGGCCTTAC TTACACGTTC
ACCCTGCGTG AGGACGTCAC CTTCCATGAT GGGGAACCGT TCAACGCTGA CGCTGTTGTC
GCAAACTTCG AGCACATCGC CGCACCCGAA ACAGCTTCTG CCCAAGCACT TGCCATGATC
GGTGGCGACC TGTTCACCGG AGCGAACGCC ACCAGCGAGT TTGAGGTGGA ACTGACCTTG
AGTGAACCCT TCGCTCCTCT CCTGACCAAC CTCACCACGG CGTTCACCGG GTTCTATTCA
CCCGCAGTGC TGCAGTCCGC CACCCAAGAC GACATCAGCG CAGGCGGCCC CGAGGTATCC
GTGGGTACCG GCCCGTTTGT CCTTGCCCAA TACACCCCAC AACAAAAACT CGTGTTCACT
CCCAACACCG ACTACGCGTG GGGGCCACAA CTGCGAGACG TTGATGGAGA ACCCCTAGCA
GCACAACCCG ACATTGACTC ACTGACCGTG CGGATCTTGC CCGAAGAAGC AACCCGTGTT
GGTGCGCTGC AATCCGGGCA AGCAGATGTG TCGGTGGACC TCACCGACAA CGCCCTCACC
CAACTTGGTG ACCTCCCCGT CCACTCCGTC GCCAGCCCTG GCCTGCCCTA CAGTGCAATC
CTCAACTGGT CCCATGGTCC CCTGTCTGAC GGTAAAGTCC GTCAAGCCAT GCAACTGGCC
CTTGACCTTG ATGCGGCAGT CCCCGCAGCC CTCGGTGACT CCTACGAGCG CGTGTGGTCC
ATCCTCAGCC CCTCCACCGT CAACGCCTAC GACCCTGCCC TCGAAGGCAC CTGGGAACGT
GACCTTGACC GCGCCAACAC TCTCCTGGAC GACGCAGGAT GGGACACCTA CGACGACGCC
GGGTACCGCA CAAAGGACGG GGAACGCCTC ACCATTGAAT GGCTGTCATG GCTGCCCTAC
CCCGACGAAC GCCGCGCCCT GGTCACCTTC CTCGTTGACG ACCTCAAAGA CGTCGGTATT
GAACTCGTTC ATGAAGTAGT CGAAGGACCC GAATACCAGG CCCGCTACTT CACCGAAGAA
GACGGCATGA TCCTCGACTT CGACGTCACC GACTGGGCAT TCGCCTCTCT CGACGCCGAC
GTTCTTCGCC AACACCTCCA CAGCCAGGGC TACCAAAACG CCACCACCGT TGCCGACGAC
AACCTCGACG CACTCCTTGT GGACGCCGCA ACCGCCACCG ACCCACGACA ACGCGAGCAG
GTGTACGCCA CCATCCAACA GTGGAACGTC GACAACGTCG CCATGATCCC GCTGTACGCA
CCCCAGTTCA CCACCGCGTG GAACACCACC ATCACCGGAA TCGCGTTCGA CGGATACGGG
TGGCCCCTGT TCCACGGGGT GAGCATCGCG GAGTAA
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| Protein sequence | MARRRARLIP AATILVGALL AATGCAADAP PVERDVVFAI AGGNLENGHM DPHSSQLDVS
AYVQRNVFDS LLALDPDTGE FVPWLATAWD ISEDGLTYTF TLREDVTFHD GEPFNADAVV
ANFEHIAAPE TASAQALAMI GGDLFTGANA TSEFEVELTL SEPFAPLLTN LTTAFTGFYS
PAVLQSATQD DISAGGPEVS VGTGPFVLAQ YTPQQKLVFT PNTDYAWGPQ LRDVDGEPLA
AQPDIDSLTV RILPEEATRV GALQSGQADV SVDLTDNALT QLGDLPVHSV ASPGLPYSAI
LNWSHGPLSD GKVRQAMQLA LDLDAAVPAA LGDSYERVWS ILSPSTVNAY DPALEGTWER
DLDRANTLLD DAGWDTYDDA GYRTKDGERL TIEWLSWLPY PDERRALVTF LVDDLKDVGI
ELVHEVVEGP EYQARYFTEE DGMILDFDVT DWAFASLDAD VLRQHLHSQG YQNATTVADD
NLDALLVDAA TATDPRQREQ VYATIQQWNV DNVAMIPLYA PQFTTAWNTT ITGIAFDGYG
WPLFHGVSIA E
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