Gene Jden_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0215 
Symbol 
ID8379410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp228409 
End bp230772 
Gene Length2364 bp 
Protein Length787 aa 
Translation table11 
GC content57% 
IMG OID645002949 
Producthypothetical protein 
Protein accessionYP_003160192 
Protein GI256831465 
COG category[R] General function prediction only 
COG ID[COG3401] Fibronectin type 3 domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.247973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTCAT CCCCTCGGCA AGGCCGGTGG CACGCATTTG GCGCGGCCAC GGCAACACTT 
GCGCTGGCTG GAACATCGTT GATTGCTGTT CCAGCGAGTG CTGCACCTGT GTCACTGTCG
TTCGATTTTG GTACCCAGTC GTCCCCCGTT GCGTCAGGGT ATACCCGGGT GTCACCAGAT
ACCACGTATT CGTCTTCCCG TGGCTTTGGG TTGACGTCGT CAGTGGATTC TCGTGATCGT
GGCGCCGGGT CTGACGATGT GCGCCGTGAC TTTGTCAATG CCACGTCCAT TGGGTTTGTT
GCTGATGTTC CTAACGGAAC GTACACGGTG ACGACTTTGT CAGGTGACAT GATTGCGACA
AGCCGCACTG ACTTCACCAT TGAGGGCCGT GCAATGGGGC ATGGTAACGC TGGTCGAGGT
TCGGTGACCG GGGTCGTCCA CAAGGATGTG GTGGTCACTG ATGGTCAGTT GACGCTGGTT
GCATCGGGGT CGAGCCCACG GTTAAATGCG GTGACTATTA CTGGCACAGC AACAGGTGGG
GGTACGTCTC CTGCTGGCGG TCGCGAAGTT GAGCGGCTTG ATCGCGGCGC GGTCGCTGTT
CCGCACGCGT CACGTGGAAA CTTGGTGTCG TGGCGCCTGG TGGCTGATGA CCCGGCGACC
GTGTCATTTA ACGTGTACCG CAATGGGTCC AAAATCAATT CAACTCCGAT CACGGATTCG
ACGAACTGGC ATGATGCGGG TGGGACCCCC GCCTCGTCAT ACGAAATCCG TAGCGTCATC
AACGGCAAAG AAACCGCCGT GGCCACAGGT CTGCGCGTGT GGGGCACAGG GTACCGTTCG
GTGAAGTTGC AGAAACCTGC CGGCGGGAAA ACCCCTGATG GCGTGAGTTT CACGTATTCG
GCGAATGATG CGTCAGTGGG TGATCTTGAT GGTGACGGCA CCTACGAAAT GATCGTCATG
TGGTCGCCCA GTAACGCAAA GGACAACTCC CAGTCGGGGT ACACGGGTGA GGTGTTCCTT
GATGCGTACA AGCTGGATGG AAAACGGTTG TGGCGTATTT CGTTGGGGAA GAACATCCGT
GCAGGCGCGC ACTACAGCCC GTACATGGTG TATGACCTCA ATGGTGATGG CCGTTCTGAG
GTGGTGCTCC GCACCGCTGA TGGCACCCGT GATGGTCAGG GCACCGTCAT TGGTGATGCA
TCGAAGGATT ACCGCAGCTC TAAGGGCTAC GTGTTGTCGG GGCCGGAATA CCTCACCTTG
TTTGACGGAC TCACTGGGGC CGCAAAAAGT ACCATCAACT ATGTCCCTGA ACGCGGCAAA
GTTTCATCCT GGGGTGACAG TTACGGCAAC CGTGTAGACC GGTTCCTCGC ATCAGTGGCT
TACCTGGACG GAAAAACGCC ATCCGTCGTG TTCCAACGTG GCTACTACAC TCGCACCGTC
GTCGCAGCAT TCGACTACAA AGGCGGCAAG CTTCAGCAGC GGTGGGTGTT TGATTCCAAC
AATCATTCTG GGACTGCAGG TAACGGTAAC CACCAGCAGT CTGTTGCTGA TGTCGACGCC
GATGGTAAGG ACGAGGTCAT TCTGGGTGCG TTGGTTCTTG ATGACAATGG CACGGTCCTT
CACAACACGA AGGCCGGTCA CGGTGATGCT CTTCATGTGG GGGACTTTGA TCCCGCCCGC
CCGGGTATGG AAATTTTCAT GGTCCATGAG GACATGAATA AGTCGGGCAA TAAGGGTTCG
ACGTTCCGTG ACGGAAAAAC TGGGAAGGTG CTGTGGTCGA CCCCAGCTTC GTCGGACACT
GGGCGTGGAA CCACGGGGGA TATTGACCCC CGTCATGCGG GTGCTGAGTC ATGGGCGATG
AGTAACCCAC GGTATTTGAT GAGCGCTGCA GGACAGCAGA TTTCCTCATC AACCCCTGCC
GCGAACTTTG TTGTGTGGTG GGATGGTGAC CTTTTGCGCG AAATTGGGGA TCACACCTAT
AACTCGTCGT TGGCGGCGGG TGTCCCCACT ATTTCGAAGT GGAATTGGAA CACGAACAAG
TCGGAACGGT TGGCAACGTT CACGGGTTCA TTGACGAATA ACACCACCAA AGGCACCCCA
GCCCTCCAGG CAGACTTGTT TGGTGACTGG CGTGAAGAAG TGGTGTATCG CTCCGATGAT
TCTGCGGAGT TGCGGATTTA CACCACCGCG ATCCCCACAT CGCACCGGTT TGTCACTCTT
ATGCAAGACC CCACCTACCG GGTGGCTGTG GCGTGGCAGA ACTCTGGTTA CAACCAGCCT
CCGCACACAA GCTTTTTCCT CGGTGAGGGG ATGAACACTC CACCTGCCCC ACAGGTGAGT
TTCACGGGAG GCAAGGGCCG CTAG
 
Protein sequence
MRSSPRQGRW HAFGAATATL ALAGTSLIAV PASAAPVSLS FDFGTQSSPV ASGYTRVSPD 
TTYSSSRGFG LTSSVDSRDR GAGSDDVRRD FVNATSIGFV ADVPNGTYTV TTLSGDMIAT
SRTDFTIEGR AMGHGNAGRG SVTGVVHKDV VVTDGQLTLV ASGSSPRLNA VTITGTATGG
GTSPAGGREV ERLDRGAVAV PHASRGNLVS WRLVADDPAT VSFNVYRNGS KINSTPITDS
TNWHDAGGTP ASSYEIRSVI NGKETAVATG LRVWGTGYRS VKLQKPAGGK TPDGVSFTYS
ANDASVGDLD GDGTYEMIVM WSPSNAKDNS QSGYTGEVFL DAYKLDGKRL WRISLGKNIR
AGAHYSPYMV YDLNGDGRSE VVLRTADGTR DGQGTVIGDA SKDYRSSKGY VLSGPEYLTL
FDGLTGAAKS TINYVPERGK VSSWGDSYGN RVDRFLASVA YLDGKTPSVV FQRGYYTRTV
VAAFDYKGGK LQQRWVFDSN NHSGTAGNGN HQQSVADVDA DGKDEVILGA LVLDDNGTVL
HNTKAGHGDA LHVGDFDPAR PGMEIFMVHE DMNKSGNKGS TFRDGKTGKV LWSTPASSDT
GRGTTGDIDP RHAGAESWAM SNPRYLMSAA GQQISSSTPA ANFVVWWDGD LLREIGDHTY
NSSLAAGVPT ISKWNWNTNK SERLATFTGS LTNNTTKGTP ALQADLFGDW REEVVYRSDD
SAELRIYTTA IPTSHRFVTL MQDPTYRVAV AWQNSGYNQP PHTSFFLGEG MNTPPAPQVS
FTGGKGR