Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0215 |
Symbol | |
ID | 8379410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 228409 |
End bp | 230772 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645002949 |
Product | hypothetical protein |
Protein accession | YP_003160192 |
Protein GI | 256831465 |
COG category | [R] General function prediction only |
COG ID | [COG3401] Fibronectin type 3 domain-containing protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.247973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGTCAT CCCCTCGGCA AGGCCGGTGG CACGCATTTG GCGCGGCCAC GGCAACACTT GCGCTGGCTG GAACATCGTT GATTGCTGTT CCAGCGAGTG CTGCACCTGT GTCACTGTCG TTCGATTTTG GTACCCAGTC GTCCCCCGTT GCGTCAGGGT ATACCCGGGT GTCACCAGAT ACCACGTATT CGTCTTCCCG TGGCTTTGGG TTGACGTCGT CAGTGGATTC TCGTGATCGT GGCGCCGGGT CTGACGATGT GCGCCGTGAC TTTGTCAATG CCACGTCCAT TGGGTTTGTT GCTGATGTTC CTAACGGAAC GTACACGGTG ACGACTTTGT CAGGTGACAT GATTGCGACA AGCCGCACTG ACTTCACCAT TGAGGGCCGT GCAATGGGGC ATGGTAACGC TGGTCGAGGT TCGGTGACCG GGGTCGTCCA CAAGGATGTG GTGGTCACTG ATGGTCAGTT GACGCTGGTT GCATCGGGGT CGAGCCCACG GTTAAATGCG GTGACTATTA CTGGCACAGC AACAGGTGGG GGTACGTCTC CTGCTGGCGG TCGCGAAGTT GAGCGGCTTG ATCGCGGCGC GGTCGCTGTT CCGCACGCGT CACGTGGAAA CTTGGTGTCG TGGCGCCTGG TGGCTGATGA CCCGGCGACC GTGTCATTTA ACGTGTACCG CAATGGGTCC AAAATCAATT CAACTCCGAT CACGGATTCG ACGAACTGGC ATGATGCGGG TGGGACCCCC GCCTCGTCAT ACGAAATCCG TAGCGTCATC AACGGCAAAG AAACCGCCGT GGCCACAGGT CTGCGCGTGT GGGGCACAGG GTACCGTTCG GTGAAGTTGC AGAAACCTGC CGGCGGGAAA ACCCCTGATG GCGTGAGTTT CACGTATTCG GCGAATGATG CGTCAGTGGG TGATCTTGAT GGTGACGGCA CCTACGAAAT GATCGTCATG TGGTCGCCCA GTAACGCAAA GGACAACTCC CAGTCGGGGT ACACGGGTGA GGTGTTCCTT GATGCGTACA AGCTGGATGG AAAACGGTTG TGGCGTATTT CGTTGGGGAA GAACATCCGT GCAGGCGCGC ACTACAGCCC GTACATGGTG TATGACCTCA ATGGTGATGG CCGTTCTGAG GTGGTGCTCC GCACCGCTGA TGGCACCCGT GATGGTCAGG GCACCGTCAT TGGTGATGCA TCGAAGGATT ACCGCAGCTC TAAGGGCTAC GTGTTGTCGG GGCCGGAATA CCTCACCTTG TTTGACGGAC TCACTGGGGC CGCAAAAAGT ACCATCAACT ATGTCCCTGA ACGCGGCAAA GTTTCATCCT GGGGTGACAG TTACGGCAAC CGTGTAGACC GGTTCCTCGC ATCAGTGGCT TACCTGGACG GAAAAACGCC ATCCGTCGTG TTCCAACGTG GCTACTACAC TCGCACCGTC GTCGCAGCAT TCGACTACAA AGGCGGCAAG CTTCAGCAGC GGTGGGTGTT TGATTCCAAC AATCATTCTG GGACTGCAGG TAACGGTAAC CACCAGCAGT CTGTTGCTGA TGTCGACGCC GATGGTAAGG ACGAGGTCAT TCTGGGTGCG TTGGTTCTTG ATGACAATGG CACGGTCCTT CACAACACGA AGGCCGGTCA CGGTGATGCT CTTCATGTGG GGGACTTTGA TCCCGCCCGC CCGGGTATGG AAATTTTCAT GGTCCATGAG GACATGAATA AGTCGGGCAA TAAGGGTTCG ACGTTCCGTG ACGGAAAAAC TGGGAAGGTG CTGTGGTCGA CCCCAGCTTC GTCGGACACT GGGCGTGGAA CCACGGGGGA TATTGACCCC CGTCATGCGG GTGCTGAGTC ATGGGCGATG AGTAACCCAC GGTATTTGAT GAGCGCTGCA GGACAGCAGA TTTCCTCATC AACCCCTGCC GCGAACTTTG TTGTGTGGTG GGATGGTGAC CTTTTGCGCG AAATTGGGGA TCACACCTAT AACTCGTCGT TGGCGGCGGG TGTCCCCACT ATTTCGAAGT GGAATTGGAA CACGAACAAG TCGGAACGGT TGGCAACGTT CACGGGTTCA TTGACGAATA ACACCACCAA AGGCACCCCA GCCCTCCAGG CAGACTTGTT TGGTGACTGG CGTGAAGAAG TGGTGTATCG CTCCGATGAT TCTGCGGAGT TGCGGATTTA CACCACCGCG ATCCCCACAT CGCACCGGTT TGTCACTCTT ATGCAAGACC CCACCTACCG GGTGGCTGTG GCGTGGCAGA ACTCTGGTTA CAACCAGCCT CCGCACACAA GCTTTTTCCT CGGTGAGGGG ATGAACACTC CACCTGCCCC ACAGGTGAGT TTCACGGGAG GCAAGGGCCG CTAG
|
Protein sequence | MRSSPRQGRW HAFGAATATL ALAGTSLIAV PASAAPVSLS FDFGTQSSPV ASGYTRVSPD TTYSSSRGFG LTSSVDSRDR GAGSDDVRRD FVNATSIGFV ADVPNGTYTV TTLSGDMIAT SRTDFTIEGR AMGHGNAGRG SVTGVVHKDV VVTDGQLTLV ASGSSPRLNA VTITGTATGG GTSPAGGREV ERLDRGAVAV PHASRGNLVS WRLVADDPAT VSFNVYRNGS KINSTPITDS TNWHDAGGTP ASSYEIRSVI NGKETAVATG LRVWGTGYRS VKLQKPAGGK TPDGVSFTYS ANDASVGDLD GDGTYEMIVM WSPSNAKDNS QSGYTGEVFL DAYKLDGKRL WRISLGKNIR AGAHYSPYMV YDLNGDGRSE VVLRTADGTR DGQGTVIGDA SKDYRSSKGY VLSGPEYLTL FDGLTGAAKS TINYVPERGK VSSWGDSYGN RVDRFLASVA YLDGKTPSVV FQRGYYTRTV VAAFDYKGGK LQQRWVFDSN NHSGTAGNGN HQQSVADVDA DGKDEVILGA LVLDDNGTVL HNTKAGHGDA LHVGDFDPAR PGMEIFMVHE DMNKSGNKGS TFRDGKTGKV LWSTPASSDT GRGTTGDIDP RHAGAESWAM SNPRYLMSAA GQQISSSTPA ANFVVWWDGD LLREIGDHTY NSSLAAGVPT ISKWNWNTNK SERLATFTGS LTNNTTKGTP ALQADLFGDW REEVVYRSDD SAELRIYTTA IPTSHRFVTL MQDPTYRVAV AWQNSGYNQP PHTSFFLGEG MNTPPAPQVS FTGGKGR
|
| |