| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0188 |
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| Symbol | |
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| ID | 8379383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 199922 |
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| End bp | 202741 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645002922 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_003160165 |
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| Protein GI | 256831438 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGACC CCGGTCTGCC AGCGGAAATG GTTCCCGCTG AGGACTTTCA TCTGTTGCCG
TGCCTCTCCA TTACTGGTGT GCTGGAACCA GACACACAAC CACTGAGGGC ATCACCGATT
TGCCTTGAGG AGACCATGAC AACCACCGAC CCCACCACAG GACTCACGCA CGACCAAGCA
GCACAGGCCC TCGACACCTA CGGCCCCAAC TCCACCCCCA CCGCACCACG CGACGGGTTT
TTCCGGCGGC TACTCGGGCA CCTGGGCGAT GTTCTTGTCA TCCTGCTATT CGTTGCAGCA
GTCATCAAAG CGTGGATGGG CGACTGGATC GACTTCACCG TCATTTTCAT TGTCGCGACC
GTGAACGTTG GGATCGGGAT GATCCAAGAA GGGCGAGCAG AAAAAGCCCT GGACTCCATC
AAACAGATGC TCGCACTGGA CGCCCAAGTC CTGCGCGACA GCCAATGGCA AAAAATCCCC
GCCGAACAGC TTGTCCCCGG CGACATTGTC CGAGTGCGCT CTGGTGACCG AATCCCCGCC
GACCTTCGCG TCCTGGACGC CACTAGCCTC CTCGTTGACG AATCGATCCT CACCGGTGAA
TCCGACGCAG TCGAGAAAAC CCCTGGCCCA GTCCCCGACG ACGCACCCAT CGGTGACCGC
ACCAACATGC TCCACTCCGG AACCCTGGTC ACAACAGGCA CCGCAGTCGC CGAGGTGACA
GCAACAGGGT TACGCAGCGA GATCGGAAAA ATTCAGGAAC TCATGTCCGA CACGGACAGC
ACCGAAACCC CACTCACACG ACAGTTAGGG GTCCTCGGCA CCCGGATCGC CATGATCGTG
GGAGTGATGG CTGTCATCAT GGTCATCATT GGCGGACTTA TCCATGGTTT CACCGGTGCA
GAACTCCTCT CAGCAACCAT TGGGTTCGCT GTCGCGGCTA TCCCTGAAGG GCTCCCCGCA
CTCGTTGCCA TCACCCTGGC CTTAGGTGTG CAAATCATGG CTCGCCGCAA CGCAATCACA
CGGAAACTCA CCTCTGTGGA GGCACTCGGA TCCGTGTCAG TGATCTGTTC AGACAAAACA
GGTACCCTCA CAAAAAACGA GATGACTGCC CGTGCTGTTG TGACCAGGAC TAACCAGTAC
ACGGTCACCG GTGAAGGCTA CGCACCAACG GGAACCATCC AGCGTGACGG GCAAGCAGTG
GACCCTGAAG ACCACGGGGA CCTGTGGCGG CTTGTGTGCG CCGCATCGGC AGCCAACGAC
TCCACTGTGC AACACGCACA CGACCAATGG ACACTGGTGG GGCAACCCAC CGACGGCGGT
ATGAGGGTCC TCACAATGAA GGCGGGGGCA CCCCAAGAAT TTGCCCGGAC CGCCTCAGTT
CCCTTTGAGT CCTCCCACAA GTTTGCGGCA ACCCTTGATC ACCTCCCCGA TCTTGATGAA
CAGGTCCTTC ACGTTGCTGG TGCGCCGGAT CGGCTCCTGG ATCGTTCCAC CCAGCACATC
GGTGATCACG GCGAGGAAGA GCCCCTTGAC CGTGCCTGGT GGGAAGACCG AATTGACGAA
CTAGCAGCCC GCGGGTTGCG GGTGCTCGCG GTTGCCCACC GGCGCCGCGA AGAGCACCGC
ACCACGCTCC GACTCGACGA CGTTAACGAC CTCACCTTCC TCGGACTTGT CGGGATTGTC
GACCCAGCCC GCCCGGAAGC GATCGACGCC ATCGAGCAAT GTCAACGCGC CGGGATCACC
GTCATCATGA TCACCGGAGA CCACGCAAAA ACAGCCCACT CCATTGCGCA GGAATTAGGT
ATTGTTGCGC GCAACGATGA CGGGACCACA ACGCTCCTCA CCGGCGCGGA CGTTGATCGA
CAATCGGACG ACGAACTTCA AGACACGGTC CGACATGTCC GCGTCTTTGC GCGCACAAGC
CCAGAACACA AACTGAGGAT CGTGCGGGCC TTGCAGCATA ACGGCGACAC GGTGGCCATG
ACCGGTGACG GCGTCAACGA CGCCCCGGCA TTACAACGTG CCGATGTTGG TGTCGCGATG
GGCATCAAAG GGACTGAAGC CACGAAGGAA GCCGCTGACA TTGTTTTGGC GGATGACAAC
TTCGCCACCA TTGAACGGGC CGTGGAAGAA GGGCGGCGGA TCTTTGACAA CATCCGCAAG
TCCGTGATTT TCCTGCTTCC CACCAATGGT GCCCAGTCGC TGGTGATCTT GTTTGCGGTG
CTTGTGGGTG CGGCCCTACC TCTGACACCT GCACAGATTC TGTGGATCAA CATGATCACG
GCGGTCACAC TGTCCCTTGC GTTGGCGTAC GAACCTGCTG AGGCAGGGCT GATGGACCGT
GCCCCACGCG ACCCGAAGGA AGGCGTCCTC ACTGCAGGTG CGTTGCTTCA TGTGGGGTTA
GTGTCGCTCC TCATTGGTGG GGTGACCCTC GCGGTTGTGT GGGTGGAGCA GGCCCGCGGA
TCAGCTGAAG ATGTCACCCA GACCACGGCG GTGATGATCC TTGCTTTTGC TCAACTTGCG
TACCTTCTCA ACTGCCGGTT CCTGCATCGG TCCAGTGTGA CCTGGGATCT TGTCAAAGGA
AACCGTGCAG TGTGGGTTGC GGCGCTCACG TTGATTGCGG TGCAACTGTT GTACACGCTC
TTGCCTGCGA TGAACACCTG GTTTGGGTCC ACACCGTTGC CGCTTGACCG GTGGTTGATG
ACCTTCGCAA TTGCTGCGGG GGTGTTCCTC GTCATTGAGG TGGGGAAAGC TGTGCAGCGC
CGGGTTCGGC CTGCGGTGAC ACCGGCGACC GTCCAGCGCG GTTCAGTGGC ATCTGCTTAA
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| Protein sequence | MIDPGLPAEM VPAEDFHLLP CLSITGVLEP DTQPLRASPI CLEETMTTTD PTTGLTHDQA
AQALDTYGPN STPTAPRDGF FRRLLGHLGD VLVILLFVAA VIKAWMGDWI DFTVIFIVAT
VNVGIGMIQE GRAEKALDSI KQMLALDAQV LRDSQWQKIP AEQLVPGDIV RVRSGDRIPA
DLRVLDATSL LVDESILTGE SDAVEKTPGP VPDDAPIGDR TNMLHSGTLV TTGTAVAEVT
ATGLRSEIGK IQELMSDTDS TETPLTRQLG VLGTRIAMIV GVMAVIMVII GGLIHGFTGA
ELLSATIGFA VAAIPEGLPA LVAITLALGV QIMARRNAIT RKLTSVEALG SVSVICSDKT
GTLTKNEMTA RAVVTRTNQY TVTGEGYAPT GTIQRDGQAV DPEDHGDLWR LVCAASAAND
STVQHAHDQW TLVGQPTDGG MRVLTMKAGA PQEFARTASV PFESSHKFAA TLDHLPDLDE
QVLHVAGAPD RLLDRSTQHI GDHGEEEPLD RAWWEDRIDE LAARGLRVLA VAHRRREEHR
TTLRLDDVND LTFLGLVGIV DPARPEAIDA IEQCQRAGIT VIMITGDHAK TAHSIAQELG
IVARNDDGTT TLLTGADVDR QSDDELQDTV RHVRVFARTS PEHKLRIVRA LQHNGDTVAM
TGDGVNDAPA LQRADVGVAM GIKGTEATKE AADIVLADDN FATIERAVEE GRRIFDNIRK
SVIFLLPTNG AQSLVILFAV LVGAALPLTP AQILWINMIT AVTLSLALAY EPAEAGLMDR
APRDPKEGVL TAGALLHVGL VSLLIGGVTL AVVWVEQARG SAEDVTQTTA VMILAFAQLA
YLLNCRFLHR SSVTWDLVKG NRAVWVAALT LIAVQLLYTL LPAMNTWFGS TPLPLDRWLM
TFAIAAGVFL VIEVGKAVQR RVRPAVTPAT VQRGSVASA
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