Gene Jden_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0167 
Symbol 
ID8379362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp177704 
End bp178465 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content58% 
IMG OID645002900 
Productprotein of unknown function DUF881 
Protein accessionYP_003160144 
Protein GI256831417 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.942049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.647694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCTG CGATAACCAC ACGATCCGCT CGTATCCGCA CTGCCGTGTC AGTGGGGGTG 
GTGCTGTTCC TTGCCCTGTG GATGATCCGC GCCAGCGCTG AGACAGCTGA CAGCCAGAAC
ACCAGGCAAT CTGAAGGCCT CGCTGACCTC ATTCGTACTG AGTCCACCCG CCAAGCTGAT
CTCATCACCA CGTTGGGGGA ACTGGAAACC TCAGTCGCGG ACATGACCAA AATTGCCGAA
ACTACACTGC CCACGCTTCC TACCAATGTA GAGAAAGCAA CGGCGTTGTC ATTGGGAATG
CAAGAAGTCA CCGGACCTGG TGTGCGCCTA GCCATGTGGG ACGCCCCGCA AACAGAAGAC
AACCTTGCCC GTTTCACCCC AGACGACCTG GTTGTTCACC AGCAAGACCT GCAAGGGGCT
ATCAACGCAC TGTGGGCCGG CGGCGCAGAA GCAATGACGC TGCAAGGACA ACGGGTCACT
CCAACCACAG CTTTCCGATG TGTGGGAAAC GTCCTGCTTC TTCACGGACA GGTGTACTCA
CCCCCGTTCG TGGTCGAAGC GGTGGGTGAC CCATCCGCCT TGACGGAGGC TGTTGATAAC
TCTCCGGTCC TTCAGGTGTA CCAACAGTAC GTGGATGTTG TGCAATTGGG GTGGGAGTTC
GCAGAGCAAG AATCGGTGAC TGCACCAGCA GCCTCTCGTG CCCCCTCCCT CAAATACGCG
ACAGTACCGG AGGACACAGA CCTGTGGCAG GTCGCTGACT AA
 
Protein sequence
MSSAITTRSA RIRTAVSVGV VLFLALWMIR ASAETADSQN TRQSEGLADL IRTESTRQAD 
LITTLGELET SVADMTKIAE TTLPTLPTNV EKATALSLGM QEVTGPGVRL AMWDAPQTED
NLARFTPDDL VVHQQDLQGA INALWAGGAE AMTLQGQRVT PTTAFRCVGN VLLLHGQVYS
PPFVVEAVGD PSALTEAVDN SPVLQVYQQY VDVVQLGWEF AEQESVTAPA ASRAPSLKYA
TVPEDTDLWQ VAD