| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0165 |
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| Symbol | |
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| ID | 8379360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 176398 |
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| End bp | 177276 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645002898 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003160142 |
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| Protein GI | 256831415 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.335904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGAC CGGACTACGG GGCTGTACAA CCTACTGACA GTGTCCCTGT GTGCAAAAAC
CACAGCGACC GTCCGTCCTA CGTGCGCTGT CAGCGGTGTG GGCAACCTAT ATGCCCTGAG
TGCACCCGCC AGGCCGCTGT TGGTGTGCAG TGCTCGCAGT GTACACAGGA GGGGGCACGT
CAGGTCCGTA CAGTGCGGAC GGTGGCCGGT GCCACCATCA CAGATACTCG CCCACTAGTG
ACCTACTGGA TTATCGGACT CAGCGTAGCG ACGTTCCTCG CACAAATCAC ACTCGGTTGG
GACCAGTTCA CCCAACACTT TGTGTTTGCC CCATTCTTAG GGCTGGACGA ACCTTGGCGG
TTTGTGACCG CTGCTCTTTT GCACTCCACA ACCCGCTACT TCCACATTCT GTTCAACATG
TGGGCATTGT GGGTTGTTGG GTCGCAATTA GAACTGATCC TTGGTCGGGC ACGGTTCATC
ACGTTGTATG TGCTTTCCGC TATCGGAGGA CACGTTGCCG TGGTTCTGCT GGCCTCGCCC
GTCAACGAAT CATGGTTCAT CCCCACATTA GGAGCGTCAG GGGCAGTGTT TGGGCTATTC
GGAGCACTCG TCCCTGTGAT GAAACGAGTG GGAGCGGACC TCCGGGGCAT TGCCGTGCTC
ATTGGGATCA ACGTGGTTCT CGGATTCATC GTCCCGAACA TCTCCTGGCA GGGGCACCTG
GGTGGGCTAC TCACGGGGGT GGTGTTGTCA GTGATTTATG TGCGCGCCCC CCAAGAACAC
AAGAAAAAGA CCGCGATCAT CGGCTCCGTT ACCGTCGCGG TCCTTCTCAT TACTCTTGCA
GTTGTGCGTT ATGCAGTTGT TGGCCAGCTC ACGTCATAG
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| Protein sequence | MTGPDYGAVQ PTDSVPVCKN HSDRPSYVRC QRCGQPICPE CTRQAAVGVQ CSQCTQEGAR
QVRTVRTVAG ATITDTRPLV TYWIIGLSVA TFLAQITLGW DQFTQHFVFA PFLGLDEPWR
FVTAALLHST TRYFHILFNM WALWVVGSQL ELILGRARFI TLYVLSAIGG HVAVVLLASP
VNESWFIPTL GASGAVFGLF GALVPVMKRV GADLRGIAVL IGINVVLGFI VPNISWQGHL
GGLLTGVVLS VIYVRAPQEH KKKTAIIGSV TVAVLLITLA VVRYAVVGQL TS
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