Gene Jden_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0092 
Symbol 
ID8379289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp101703 
End bp102947 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content61% 
IMG OID645002827 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003160071 
Protein GI256831344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.031642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.214383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACAAG AAACCACACA GGTTGCGTCA ACAAGCATGA GGCCTGTGTG GTTTCTTGCT 
GCCTCGCAGG GGTTTCAGGC ATTGAGCACG GCGGTGTTTA CCGTGTCGGT GGCGCTCGTT
GCGGGCAAGA CAAGTGACTT TTTAGGTTTG GGCTTGATCC TCGCGGCACG AACGTTACCG
ACTGTTGTGG TGGCGTTGGT GGGTGGGGTT GCTGCTGACC GGTGGCGCAA GAAAACAGTT
GCGGTCGCCA CGTTGCTGGG CACAGCGGTT GTGTCGTTGC TGATCGCTGC GGTGATCCCG
GTGACGGGGT TGACCGGTTA CATTCATGTT TTGGCGTTGG TTGCCGGGCT GATTTCTGCG
TTTGGTGCCC CGTCGCTGTA TTCGTTGTTG CCGGCCATTG TGGCTAAGGA GAACAACTTC
CGTGCGAACG CGTTGGTGCG AACGTGGCGT AATGGGGGCA TGTTAGCTGG TCCTGTGGTG
GCGGGGCTGT TCGCTGCCCA GTGGGGTGCG GCAAGCGGTG TGGCGGTCAG TGCGGTGTGT
GCAGGCGTGG GGGCGTTGTT CATCGCGATG CTTCCGGTGA CGGAACAGGC CCGACCGGTG
CGCAGTATTC GTGGGGACCT TGCGGAAGCT GTGGGTTTTG CCCGGCACAC CAGGTGGTTT
ACGGTGATGA TCGGTTTTTG GGCCGTGTAT TTGGCGTTGC AAGGTGGCGC TGGTGGAGTT
GTGCAGCCTG TTGTGGTGGC CCAGATCAGT GGGGATCGGG TGTGGTCGTG GATGGCTGCG
TGTCTGGCGG CTGGGTACAT TGCGGGCAGT GTGGGGGCCA CCCGGTGGCA GATGTCCCGC
CATTTGGTGA CGGGAAGTGT TGTGTGGGTG GGGTTGAGTT GTGTACCGCT TGTTGCGGTG
GCGCTGACCG ATGTGGTGCC GGTGTGGTTA GTGGCCTCGT TTATTGCCGG GGTTGGGTTG
GAAGTGTCCG GGGTGGCGTG GGGGTCGGCG CTGCAAACCC GGGTGGATAG CGACAATATT
GGGAAGGTGT CATCGCTGGA CTATGCGGTG AGTTTCGGGT TTGTGCCCGT AGGTTACGCG
GTGTTTGGCG TAGTGGGTTC GGTTGCTGAT GGCCGTGTTG TGTTGGCGGT CAGTGGTGTT
GTCATGGCGG TGTTCGCCGT AACTGCGGGG CTGGTGTCGT GGGCGCAACG GTTTGATCCT
CTTCCCGATG CGCCCACGTC TGACACCGCT GCTCCTGTGG GGTAG
 
Protein sequence
MKQETTQVAS TSMRPVWFLA ASQGFQALST AVFTVSVALV AGKTSDFLGL GLILAARTLP 
TVVVALVGGV AADRWRKKTV AVATLLGTAV VSLLIAAVIP VTGLTGYIHV LALVAGLISA
FGAPSLYSLL PAIVAKENNF RANALVRTWR NGGMLAGPVV AGLFAAQWGA ASGVAVSAVC
AGVGALFIAM LPVTEQARPV RSIRGDLAEA VGFARHTRWF TVMIGFWAVY LALQGGAGGV
VQPVVVAQIS GDRVWSWMAA CLAAGYIAGS VGATRWQMSR HLVTGSVVWV GLSCVPLVAV
ALTDVVPVWL VASFIAGVGL EVSGVAWGSA LQTRVDSDNI GKVSSLDYAV SFGFVPVGYA
VFGVVGSVAD GRVVLAVSGV VMAVFAVTAG LVSWAQRFDP LPDAPTSDTA APVG