Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0087 |
Symbol | |
ID | 8379284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 96784 |
End bp | 97476 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645002822 |
Product | uracil-DNA glycosylase |
Protein accession | YP_003160066 |
Protein GI | 256831339 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.179154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.734007 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGA CCCTCACTGA ACTGGCCGAA GATCACCTCA TTGCCGCAGA CTGGGCACAA GCGTTGGAAC CGGTCGCCCC CACGATCGCT GCACTGGGTG AACGGTTGCG TAGTGAAGTC AGCGCCGGGC GTGGGTATCT ACCGGCCGGG GACCATGTGT TACGGGCGTT TCAACGCCCA CTCAACGATG TGCGGGTCCT CATTGTGGGG CAAGACCCCT ACCCCACGCC GGGGCACCCC ATTGGGTTGT CGTTCGCCGT TGACAAACGG GTGCGGCCCA TTCCACGCAG TTTGGCGAAC ATGTACCGAG AATTGCACGA CGACCTGGGG TTCCCGCCCG CAGAGCACGG CGATCTATCC TCCTGGGCGG ATCAGGGAGT CATGCTGCTC AACCGCGTCT TGACCGTGCA ACCAGGGAAA CCCGCCTCCC ACCGCGGGTG GGGGTGGGAG GCAGTCACAG AACATGCCAT CACAACGTTG GTCGCCCGCA ACCGTCCCCT CGTCGCCGTG CTCTGGGGTC GAGATGCTGC GAACCTGAAA CCCCTGCTTG GCTCCACCCC CACCGTCGTG TCACCGCACC CTTCACCGTT GTCCGCTCAC CGTGGGTTCT TCGGGTCGCG GCCATTTTCT CAGGTGAATG CACTGTTACA GGAGATGGGG GCAGAACCAG TGAACTGGCA GGTGGCGCCA TAA
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Protein sequence | MAKTLTELAE DHLIAADWAQ ALEPVAPTIA ALGERLRSEV SAGRGYLPAG DHVLRAFQRP LNDVRVLIVG QDPYPTPGHP IGLSFAVDKR VRPIPRSLAN MYRELHDDLG FPPAEHGDLS SWADQGVMLL NRVLTVQPGK PASHRGWGWE AVTEHAITTL VARNRPLVAV LWGRDAANLK PLLGSTPTVV SPHPSPLSAH RGFFGSRPFS QVNALLQEMG AEPVNWQVAP
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