Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0084 |
Symbol | |
ID | 8379281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 93022 |
End bp | 94125 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645002819 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003160063 |
Protein GI | 256831336 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.650398 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGCCA CCCAACGCCA CACACGAGAA GCGCTCGCAG GTGTACGCGC CCAACCAGTG ACGTCAGCGC TCCTGATCCT CATCGCAGCA ATATCCTGCG CCCTCATCCA ACTCACCACC GGCCGCACCG CCGGGGTCGA AGCGGACCTC CTCAACCAGA TCGACGAGTC CACATCACGC ATGATCGTGG TGCGTGCCCA ACCCGATGCC GGGCTCACCA TGGGGGTGCT CCCAGCCCTC CAAACAATCC ACGAAATCGA GAGCGTGATG GTGCTTGGCC CTGCCACAGA CATCCACAAC ACCGACCGTG GCCCCACATC ACCAGTGATC GCCTCGCGCC CCATCCCCGC GCAACTGTGC GCAAGCTACG TGACCTGCCA AACAGGCACA GTCAGCAGTG CGCTTCTTGC TACTAAAGCA GCGCAACACA CCCTCGGGGT GAGCCCCGGC ATGGGGACGC TCACGGGGAC AGATGGCATC ACCTACGGGG TTGGTGAAAC GATCGCACTG CCCGCGCACC TCGCCGCCCT GGAACCGCTC GCGTTGACGC CAATTCACAC CGACGACCTC GCCACACAAC CCGCCGCAAT GATCATTGTG CTGGTGAAAA ACAGCCACGA ACTCGCCGCC GTCACCGCAA CGCTCACCAC CCTCATTGAC GTACCCGACC CTACTAAAAT CAGCCTCGAC ACCGGCGCCT CCTACGCCGA GCTGCGCGCC GGAATCTCCG GGCAAGTCGG CACCTACGGG CACGGTCTCC TCGTGATGCT TCTGCTTGGA ACGGGGGCAG TGATTGGTGC GATCGTGCTG GGTGTGGTGT TGCTGCGCCG CCGCGAATTT GGTCGCAGGC GCTCTCTCGG TGCCACCCGC ACCTGGCTCA TCCGGTACGT CATCACGCAA GTAGTTGTGC TGGTCGCGGT GGGAGCGGTG ATCGGCACAA TTGCTGGGCT CGTTGTCCTC GCTGTGGAAA GCGCGCCGAT GCCCGCCCCC AGTTTTGTGC TCGCCGTCCT CACGTTGACG CTCAGCGCCG CCGCAGTGTT TGCGGTGTTA CCCGCAGCGT ATGCGGCCCG CCGTGACCCC GTCGCTGAGT TGCGCGTCCC GTAA
|
Protein sequence | MTATQRHTRE ALAGVRAQPV TSALLILIAA ISCALIQLTT GRTAGVEADL LNQIDESTSR MIVVRAQPDA GLTMGVLPAL QTIHEIESVM VLGPATDIHN TDRGPTSPVI ASRPIPAQLC ASYVTCQTGT VSSALLATKA AQHTLGVSPG MGTLTGTDGI TYGVGETIAL PAHLAALEPL ALTPIHTDDL ATQPAAMIIV LVKNSHELAA VTATLTTLID VPDPTKISLD TGASYAELRA GISGQVGTYG HGLLVMLLLG TGAVIGAIVL GVVLLRRREF GRRRSLGATR TWLIRYVITQ VVVLVAVGAV IGTIAGLVVL AVESAPMPAP SFVLAVLTLT LSAAAVFAVL PAAYAARRDP VAELRVP
|
| |