Gene Jden_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0037 
Symbol 
ID8379237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp44338 
End bp44967 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content60% 
IMG OID645002775 
Productprotein tyrosine phosphatase 
Protein accessionYP_003160019 
Protein GI256831292 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.895909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.151139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGTG ACGTGTTTTC GATTTTGACG GTGTGTACGG GCAATATTTG TCGGTCGCCG 
TTGGGTGAGC AGTTGTTGGC GCAGCAGTTG GCGGATCTTG CTGATGTGCG GGTTGCGAGT
GCGGGCACGG GTGCGTTGGT GGGGCATGGG ATGCCTGATC AGTCGTTGGC GATTGCTCGC
TCGTTGGGTG TTGTGGATCC TGAGTCGCAT GTGAGTCGTC AGTTGACGCC GGAGTTGTTG
GATGAGTCTG ATGTGGTGTT TGCGATGGCT CGTGAGCATC GGCGGGCGAT TGTGGAGTTG
AATCCGCGGG TGTCGAAGCG GGTGTTTACG TTGCGTGAGT TTGCCCGGTT GGCGGATGCG
ACGTCGGATG ATGATTTGCG CGCTGAGTTT GCGCCGGGCC CTTTTGGTGG GGATGTGCCG
TCGTCGCCGG TGGAGCGGTT GCGTGCTGGG GTTGCGGCTG TTGCTGCGGG TCGGGGTATG
TTGCCGCCGT TGGCGGATCC GTTGGGTGAT GATGTGGTGG ACCCGTATCG GCGTAGCCAG
GATGTGTATG ACCAGTCGAC GCGGGAGATT GTTCCTGCGG TGTCGTCGAT TGTGAGTTTG
CTGCGGCGGG CTCTTGCGTT GGAGGTGTGA
 
Protein sequence
MVGDVFSILT VCTGNICRSP LGEQLLAQQL ADLADVRVAS AGTGALVGHG MPDQSLAIAR 
SLGVVDPESH VSRQLTPELL DESDVVFAMA REHRRAIVEL NPRVSKRVFT LREFARLADA
TSDDDLRAEF APGPFGGDVP SSPVERLRAG VAAVAAGRGM LPPLADPLGD DVVDPYRRSQ
DVYDQSTREI VPAVSSIVSL LRRALALEV