| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0035 |
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| Symbol | |
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| ID | 8379235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 41893 |
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| End bp | 43356 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645002773 |
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| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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| Protein accession | YP_003160017 |
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| Protein GI | 256831290 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.179777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCCCTCT TAACTGCGTC TCCTCGGGAG AAGGTCGATC GGTGGCAGCA TGATTATGCT
CAGCGGCTGT TTCTCAGCGA CCTTACGGTG ATTGCGGTGT GTGTGTTTGG TGCTCAACTG
TTGCGGTTTG GCACGAGCAT GCAGGAGTTG TCGGTGGAGT CGGCGGACCG GTTTTCGTTT
GTGCTCAGTT ATTCAACGGT GTCGTTGGTG CTGATTTTTG GGTGGATGCT TGCGTTGCAG
TATTTTGACA CCCGCGATTA CCGGATTACG GGGACGGGGC CGGAGGAGTA TAAGCGGATC
CTGGACACTT CTGTGCGGGT GTTTGGGTTG TTGGCGATTA TTGATTTGTT GACTCGGGCG
AGTATTGCTC GCGGGTATTT GTTGATTGCG TTGCCGTCTG GGTTGTTTTT CTTGTTGTTG
ACCCGCTGGT TGTGGCGCAA GTGGTTGCAT AAGCAACGTG CTGAGGGGCA GTACCTGCAT
AAGGCTGTCA TTGTGGGTGA CTACGACAAG ATTAAGCATG TCGCTGATGA GATTGGTCGT
TCACCAGCTA ATGGGTATGC CCTGGTGGGC GCGGTGTCGA CGACGAAGGA CGGCAAGGAT
CTGGCTGTGG CTGGGGTCGC GGTGCAGGGG AATTACGATG CGATCCTCAC GACTGTGGAG
GGTACGGGTG CGGACACTCT CATTATGACG AGTGCTGATG TGCTTGGCCC GAAGAAGATG
CGCCGCCTGG GGTGGGAGTT GGAGCAGCGG GGTATTGAGA TGGTGGTTGC CCCGGCTTTG
ACGGATGTTG CTGGGCCGCG CATCCATATG CGCCCGGTTG CTGGTTTGCC GCTCATCCAT
GTGGATTTCC CGCAGTTTTC GGGGCAGAAG TATTGGATGA AGCGGGCGTT TGATGTGGTG
GGGTCCGCGT TTCTTATTGT GGTGTTGAGC CCCATCATGG TCACTGTTGC GGTGTTGGTG
AAGCGGGATT CCCCTGGTCC GGTGTTGTTC CGTCAGGGGC GTATTGGGCA CAACCAGGAA
CCGTTCAAGA TGTTGAAGTT CCGTTCCATG GCGATCGATG CGGAAGCGAA ACTCGCGGAG
TTTCTGGACC GTAACGACGG GAATGGTGTG TTGTTCAAAC TCAAGGATGA CCCACGGGTC
ACACGGGTGG GCCGGGTGTT ACGCCGGTAT TCACTTGATG AGTTACCGCA ACTGTTTAAC
GTGTTGAAAG GTGACATGTC TTTGGTGGGG CCACGCCCAC CGCTGCCCGT TGAGGTGGAA
AAGTACGACG ATCATGCGCT GCGCCGTTTA CTGGTGAAAC CTGGGATCAC AGGTTTGTGG
CAGGTCAGCG GCCGGTCTGA CTTGTCGTGG GACGACAGCG TCCGCCTTGA CCTGTATTAC
GTCGAAAACT GGTCCATGAT GAGCGACATC ATCATCCTGT ACCGCACAAT CCGAACGGTG
GTGACCCCCA GTGGCGCTTA TTAG
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| Protein sequence | MALLTASPRE KVDRWQHDYA QRLFLSDLTV IAVCVFGAQL LRFGTSMQEL SVESADRFSF
VLSYSTVSLV LIFGWMLALQ YFDTRDYRIT GTGPEEYKRI LDTSVRVFGL LAIIDLLTRA
SIARGYLLIA LPSGLFFLLL TRWLWRKWLH KQRAEGQYLH KAVIVGDYDK IKHVADEIGR
SPANGYALVG AVSTTKDGKD LAVAGVAVQG NYDAILTTVE GTGADTLIMT SADVLGPKKM
RRLGWELEQR GIEMVVAPAL TDVAGPRIHM RPVAGLPLIH VDFPQFSGQK YWMKRAFDVV
GSAFLIVVLS PIMVTVAVLV KRDSPGPVLF RQGRIGHNQE PFKMLKFRSM AIDAEAKLAE
FLDRNDGNGV LFKLKDDPRV TRVGRVLRRY SLDELPQLFN VLKGDMSLVG PRPPLPVEVE
KYDDHALRRL LVKPGITGLW QVSGRSDLSW DDSVRLDLYY VENWSMMSDI IILYRTIRTV
VTPSGAY
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