Gene Jden_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0030 
Symbol 
ID8379230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp34041 
End bp35084 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content46% 
IMG OID645002768 
Producthypothetical protein 
Protein accessionYP_003160012 
Protein GI256831285 
COG category[S] Function unknown 
COG ID[COG2327] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0361636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAAAG TGCTTTTGCT ACATGCATAT TCGGCAAAAA ATACGGGCGA TGGATTATTA 
GTCGATTCCG CAATAGAATT TCTAAACGAA TGCTATGAAG ATCCTGAAAT TACTTTATTG
GCAAGTTATC CGAATACTTT TGCTGATAGA AAGTGTAGAG TTCTTCCCAT TCTTCCAACA
TCTGCCGACT GGTTTAAGAC CATTAATGTC CTGATTCGAG CCAGCTGCTT CGATCTCGTC
TGTGGAGTTG GGGGTGGGTA TCTTCGCTTT GGCAAGCCGA TTGAGTCCAT AAAAACTTCT
CTAGTGCATC TACCTCAACT GTTATTCGCG GCTTTTGCGC GGACTCCAAG TATATATCTT
CCACAAAGCA TAGGTCCGGT CAACAGATTT CAGCGTCCGC TGGTCTCGTA TCTTCTTTCC
AAAATTGATC TGATTGCATT ACGTGACAAC CGCAGTGTGA GTGAGCTAGC ACTCAGTAAT
GTTCGGCGCA TACCTGACAT GGCGACATTT CGCATTTCTC CCGGGGTTGG TAGAAAAATT
CATGTGGATG CAACTCCGGT ATTATCCGTC CGAAACATAC GTGGCCAGCT TCCGAGGGAA
ATACATCAGC TTTCGCAAGC ACTAGGGGAG TATGACACTT TTGTGCAAAG TTCAGTGTCG
GGTAATGATG ACCGTGCTGC CACCGCGACA TTGAACGGAA CTAGAGAACT CTCAAAGGAT
GAACTTCTCG TCAACTCATC ACAACCGCGG ATAGTTGTGG CTGTCCGGCT TCATGCCGCT
TTAATGGCTA TAGCAGCCGG ACATTATGTA ATCCATTTAG CGTACGAAAG AAAGGGCTTT
GGAGCCTTCT CTGATCTAGG GCTTTCTGAG TGGGTGCACA ATGTTCACAA CTTCGATAGT
GCAACCGTTG CATCGCAGGT ACGGTGTCTT CTCGATAGCA AAGAAACAAG AGAGAGATAC
AATCGAGCGC TCGAAGCCTC CAAAGAAGCT ATACTCAATG GCCATTCGGA GCTTATTAGA
GAAATGAAGA AAGTCCAAAA ATGA
 
Protein sequence
MTKVLLLHAY SAKNTGDGLL VDSAIEFLNE CYEDPEITLL ASYPNTFADR KCRVLPILPT 
SADWFKTINV LIRASCFDLV CGVGGGYLRF GKPIESIKTS LVHLPQLLFA AFARTPSIYL
PQSIGPVNRF QRPLVSYLLS KIDLIALRDN RSVSELALSN VRRIPDMATF RISPGVGRKI
HVDATPVLSV RNIRGQLPRE IHQLSQALGE YDTFVQSSVS GNDDRAATAT LNGTRELSKD
ELLVNSSQPR IVVAVRLHAA LMAIAAGHYV IHLAYERKGF GAFSDLGLSE WVHNVHNFDS
ATVASQVRCL LDSKETRERY NRALEASKEA ILNGHSELIR EMKKVQK