| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0029 |
|---|
| Symbol | |
|---|
| ID | 8379229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 32968 |
|---|
| End bp | 34044 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 645002767 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003160011 |
|---|
| Protein GI | 256831284 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.021133 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATT CAATATTAAT CGTTTGCCCG TGGTTAATGA ATGGTGGAGC GCAAAAGGCG
CTAATAGGTA TCCTGAAGAG ACTGCCGAAA TCAGAAATTA AGCTTCTAAT ACTTTTCTCT
GGGAACACAG ATCTAACCGA ATTTGATAAA TACGCAAATA ATACTCTTGT GCTTAACCAT
TCACGTTCAG TGTCTGGAAT CGTCCGTGCA GCTCGAGATA TTAGACACCA ACTGAAAGAT
TTTCAGACCG TTTACTCTCT AATGCGAGCG AGTCATCTAG TTATGGGTTT AATACCAAAA
AGATCCCTAA AAGACAAGCG ATTAATAGGC AGTCTTCATC AATTACCTAG TTCGGATAGG
ACTACTTTCA TTGGTAAACT AGAAGATCTT CTAGTGAAGA GATATCTTAG GCAGGTAGAC
TACATCACCG CACCCTCAAA ACGAGCTCTC GCGGAGGCAG TAGAGTACGG CTATAGCGAA
GACAAGAAAT GCATTTATGA ACCCAACATT ATCGACTTTA TTTCAAACAA GGCACTCGAC
GTACGACAAG GTGACCTAGA TGTAATAAAG CTGGTGGCAG CTGGGAGGTT AACCGATCAA
AAAGGGTTTG ATCGAATCCC GGAATTACTG AAACAAGTAA CGTTACCGGT CCATATAAAG
ATTCTTGGTG ATGGACCTGA TCGAGACAAG ATTCATAATA TTTCACGAGA TCTTTCCCCT
GAAAATAAAG TAGAATTGGT CGGCCACGTA GATGATGTCG GCCCATACAT AGATTGGAGT
GATGCGATTT TTATGCCAAG CCGAGCTGAA TTAAACCCAG TGTTTGTATG GGAAGCGTTT
TCTAGAGGAC GAGGCGTTGT CGCGAGCGAA TTACCAGTTT TTAAGGATCT CAGGAACGAA
TACAACTGTG TAATACTATT CTCAGACACT AATGATCTTG AAACTGGCCT GCAAAAGTTG
AAATATCAAT GTTTTAGAGA AGAATTGATG GAGCATGCTA TCCGAGCAAC TAGCGACTAC
AGGAAGAGCA TAGAAACGTC GAAGTTGATC GAAGTTCTGA AAGGGAAAAT GTCGTGA
|
|---|
| Protein sequence | MKNSILIVCP WLMNGGAQKA LIGILKRLPK SEIKLLILFS GNTDLTEFDK YANNTLVLNH
SRSVSGIVRA ARDIRHQLKD FQTVYSLMRA SHLVMGLIPK RSLKDKRLIG SLHQLPSSDR
TTFIGKLEDL LVKRYLRQVD YITAPSKRAL AEAVEYGYSE DKKCIYEPNI IDFISNKALD
VRQGDLDVIK LVAAGRLTDQ KGFDRIPELL KQVTLPVHIK ILGDGPDRDK IHNISRDLSP
ENKVELVGHV DDVGPYIDWS DAIFMPSRAE LNPVFVWEAF SRGRGVVASE LPVFKDLRNE
YNCVILFSDT NDLETGLQKL KYQCFREELM EHAIRATSDY RKSIETSKLI EVLKGKMS
|
|---|
| |