Gene Jden_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0020 
Symbol 
ID8379220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp22211 
End bp22894 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content58% 
IMG OID645002757 
Producthypothetical protein 
Protein accessionYP_003160002 
Protein GI256831275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.425682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTTTT TTCGTCGTCT GAACCCCGCC ACCCGGTTGG GTGTGAGTGT TGTTGTGGCT 
GCGGTGGTGT TGGTTGGTTG CGCTGGTGGG GATGATCCTG CCGATGCGCC GTCCACATCG
TCCAGTTCGT CAGCGTCAGA TGGGGGTGTG TCGAGTGCCC CGGCGGTGGC TCAGTCTGTT
GACCAGTTAC CCGGCTGGGC GCAGGAGTTG TTGGCGTCCC ATGGTCTTGA TGGGTTGGAC
GCAACAGAGA TTGTGTCAGT GTTGGATGAA ACCCCTGTTG CGGAACGTCC AACAGACCTC
ATCGCGTCGG TTCGCCCTGA TGCGTTGATG ATTATTGATG CGGCCGGTCA GGAAGCCCCG
CTTGCTTTGC CGGAGGACCT GTTCTACGTG TCGTTTGCGC CGTACCTCAC CCAAACACAT
GAGTGCCATT TCCATTCGCT GACCACGTGC AAGGGTGAGC TGAGTGGTGT CCCGGTGTCG
GTGTCGATCA CGGATGACTC GACCGGTTCG CTTCTGGTTG ACGGTGAACA GGTCACGTAT
GACAACGGGT TTACCGGGGT GTGGTTGCCC AAGGGAATTG ATGCCACGGT GACGGTGACC
TATGACGGGA AGCAGGGCTC TGTTCCGATC AGTACCCGAA ACAGTGACGA TGCGACCTGT
GTGACGACCC TCCACCTCAC CTAG
 
Protein sequence
MVFFRRLNPA TRLGVSVVVA AVVLVGCAGG DDPADAPSTS SSSSASDGGV SSAPAVAQSV 
DQLPGWAQEL LASHGLDGLD ATEIVSVLDE TPVAERPTDL IASVRPDALM IIDAAGQEAP
LALPEDLFYV SFAPYLTQTH ECHFHSLTTC KGELSGVPVS VSITDDSTGS LLVDGEQVTY
DNGFTGVWLP KGIDATVTVT YDGKQGSVPI STRNSDDATC VTTLHLT