Gene Jden_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0016 
Symbol 
ID8379216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp18470 
End bp19663 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content60% 
IMG OID645002753 
Producthypothetical protein 
Protein accessionYP_003159998 
Protein GI256831271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.916404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTTC GTCGTGGTGT TGTTCTTGGT GCGGTTGCCG TGCTGGTGGC TGCGTGTGGG 
GGAGCACCAC CTGCCGATGC GCCCGCTGAG TCACCGACGA CCGCACCACC GGCTGTGGTG
GCACCGTCTG TTGTGGAAGG GGACCTTCCG GCAGCGGATC TTCGTGGTAC ACAGATTCCG
TACCAGTTTG AGGAACTGAC GGCTGTGACG GTTCCGTGGG ATGGCGCCCC TCAGGAACGT
GACGGCGTGT TTGTGGGAAC TCAGACAACT GGTCAGCAGG TCACGTTCAC GGCAGTCACC
CATCAGGGCA CAGCGCTGTG GGAGGTGTCT CGGCCACAGC AATGTGGCCA GTTCACATTG
ACCACTGTCG ATGACATGCC ACTTGCCGTC CTGTGTACAA CCACTGAGGA TGGTTTCGTA
GCCCATGGGA TTGACGCAAC GACTGGTGAC GTAGTGTGGG GGCCCACTGC TGTTCCTGGT
CCTCTCACTG GACTAGGTGT TGTCTTCACT GTCCAAGGAA CACCCGCTCC CGGTGACGTG
TCAGACACGG TGGTACTCCG CGCGGACACT GGCGAGGTCG TGTCGTGGCC ACAGTCACTG
CCTGACGACG CACACGTTAT CGGGGAAAAA GACGGTCTGA TTCTCACAGT GCACAACGGA
ACCCTTGAGG CGTGGGATTC TCAGACAGGG GAGCGCAGTT GGTCGATTCC CGCCCCACAC
GGTGCACAAC AGGTTGGGGA CTCACCGCTG GGACAAAGGT TTGTTGAGGT GGTCGGGGAG
TCCACGTCAG TTGTGGTGGA TACGCGTGAC GGTGATGTTG TCGCTTCCGA TGTGATCACT
GCAGGCACAG ACCCGTCAAC GGGCACCCTT GTGGTCCTCG ATGACGAGTC CACCTCCGGG
GTTGATGAAT CTGGGGCCAC ACTCTGGTCA ATTCCACGGG AGTTGCCGTT AGGGTCTGGT
GACACAAGTT CACAGGCACC ACCACAGATC ACCGCAGCCG GTGGCGTCAT GGTGTATGTG
CGTGAGGGCG CACTGATCCG CGCGCACAAC GCCCTGACCG GTGATGTTGC TGAGGCATAT
CCGCCGGGAG GGAACGGAAC AATCCTCGTT CCGGTGACCA TGTCAGCCAC AGGGGCCGGC
GTTCTCACCG ACTACGACAC CTACACTCTC GTGACCACAC TCCACGAACC CTGA
 
Protein sequence
MFVRRGVVLG AVAVLVAACG GAPPADAPAE SPTTAPPAVV APSVVEGDLP AADLRGTQIP 
YQFEELTAVT VPWDGAPQER DGVFVGTQTT GQQVTFTAVT HQGTALWEVS RPQQCGQFTL
TTVDDMPLAV LCTTTEDGFV AHGIDATTGD VVWGPTAVPG PLTGLGVVFT VQGTPAPGDV
SDTVVLRADT GEVVSWPQSL PDDAHVIGEK DGLILTVHNG TLEAWDSQTG ERSWSIPAPH
GAQQVGDSPL GQRFVEVVGE STSVVVDTRD GDVVASDVIT AGTDPSTGTL VVLDDESTSG
VDESGATLWS IPRELPLGSG DTSSQAPPQI TAAGGVMVYV REGALIRAHN ALTGDVAEAY
PPGGNGTILV PVTMSATGAG VLTDYDTYTL VTTLHEP