| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0015 |
|---|
| Symbol | |
|---|
| ID | 8379215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 16989 |
|---|
| End bp | 18386 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645002752 |
|---|
| Product | protein of unknown function DUF195 |
|---|
| Protein accession | YP_003159997 |
|---|
| Protein GI | 256831270 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGTCC TCATCCTTGT CCTTGTGATC GCCAGCATTG TGCTAGGTGT CGTCAACCTT
GTTGCGGTGC GTGCAGGGTC ACACGACACC GGATTATCGA TGCAGGAACT CGAGTCAATC
CGCATGGCGG CAGCAGCAGG TAATGGCGAC ATCCGCCAGG ATTTGTCGGT CCAACGCACC
GAACTTTCTC AAACACTTGC TCACCAGGAC GCAGCCCGCA CCCAGGCGCA AACGCGGTTC
CGTGAAGACG TGGAACGCCA ACTCGACGAG TTCGCGCAAC GCAACGCGCT CGCGTTGGAA
AAAATTCAGG CAGCTGTTGG GGAACGGTTG CAGCTGTCGT TGAGTGAGTC TCGGGACCGG
ACGACGAAGG TTCTCCAGGA GCTTGCGGAA CGCAATGCGG TGTCTCACCG CGAGTTGCAG
CAGGTACTTC GTGAGGAGTT GGAGAAACTA CGGGCTGGTA ATGAAGCGAA ACTCGAAAAG
ATGCGGGAAA CCGTTGATGA AAAACTCCAA GGTACGTTGG AAAAACGGTT GGGTGATTCG
TTTGCGATCG TGTCGCAACG TCTCGAAGAG GTCCACAAAG GGTTGGGCGA AATGCAGAAT
CTCGCTTCTG ACGTGGGCGG GCTGAAGCGT GTTCTCACCA ACGTGAAAAA CCGTGGTGGC
TGGGGTGAAG TTCAGTTATC TCGGCAGTTG GAGGATTTCC TCACCCGGGA ACAGTACGCG
GAGAACATCA TTATCAAGGA GCACAGCCAA GAATCTGTGG AGTTCGCGGT GAAAATGCCG
GGCCGTGACC CAGAGGGCTC TGAGGTGTAT TTGCCTATTG ACTCCAAGTT CCCCCAGGAA
GACTACGAAC GGCTCTTGGA AGCCCAAGAA CTTGGGGATC GTGCTGCGAT TGATGCCAGC
GCAAAAGCGT TGGAACGCGC TGTTGTTGAG CAGGCAAAGA AGATCAGCGA CAAGTACATT
TCCCCGCCGC GGAGCACGGA TTTTGCCATC ATGTACTTGC CTACGGAAGG TCTTTTCGCT
GAGGTTGTGC GCCGACCTGG GCTGGCGAGT CGCCTCCAAA ACGACCACCG TGTCCTCATC
ACTGGCCCAA CGACGTTGAT GTCGTTGTTG AACTCTTTGC AGTTGGGGTT CCGCACTCTT
GCCATTGAGA AGCGTTCCTC TGAGGTGTGG CAAATCTTGG GTGCAGCGAA AGCTGAGTTC
CGTAAGTACG GGGACGTGTG GGAGAAGTTG GGGAAACAGT TGGCAACAAC TCAACGCACT
GTGGAGGAAG CAGGGCGGCG CACCCGAGCT GTGGAACGAC GACTTCGCAC CATCGAAACC
ACCGAAATCG AATCTGCGGA CACCGACGTC AACGACATTC TTGCGCTACC GGGTGGGGAA
GACTCCGACG ATGAGTAG
|
|---|
| Protein sequence | MDVLILVLVI ASIVLGVVNL VAVRAGSHDT GLSMQELESI RMAAAAGNGD IRQDLSVQRT
ELSQTLAHQD AARTQAQTRF REDVERQLDE FAQRNALALE KIQAAVGERL QLSLSESRDR
TTKVLQELAE RNAVSHRELQ QVLREELEKL RAGNEAKLEK MRETVDEKLQ GTLEKRLGDS
FAIVSQRLEE VHKGLGEMQN LASDVGGLKR VLTNVKNRGG WGEVQLSRQL EDFLTREQYA
ENIIIKEHSQ ESVEFAVKMP GRDPEGSEVY LPIDSKFPQE DYERLLEAQE LGDRAAIDAS
AKALERAVVE QAKKISDKYI SPPRSTDFAI MYLPTEGLFA EVVRRPGLAS RLQNDHRVLI
TGPTTLMSLL NSLQLGFRTL AIEKRSSEVW QILGAAKAEF RKYGDVWEKL GKQLATTQRT
VEEAGRRTRA VERRLRTIET TEIESADTDV NDILALPGGE DSDDE
|
|---|
| |