| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0005 |
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| Symbol | |
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| ID | 8379205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 5370 |
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| End bp | 7430 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645002740 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_003159987 |
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| Protein GI | 256831260 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.217672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.192252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGAAC TCAACACCAC CGCGACCGAT CCGAACACTC CGACGCAGTC TGTGTCCCCA
GCGCAACATC AGGGAGCCTA TGACGCGAAC GCGATTACCG TCCTTGAGGG GCTGGAAGCG
GTTCGGAAAC GGCCTGGGAT GTACATTGGG TCAACCGGTG AGCGTGGTCT TCACCACCTT
GTCTACGAAG TTGTGGATAA CTCGGTTGAC GAGGCTCTCG CCGGTCACTG TGACACCATT
AACGTGACCA TCTTGGAAGA TGGGGCTCTA GAGGTGTCGG ACAACGGGCG CGGAATCCCA
GTTGCTATCC ACCCCACTGA GGGGCGCCCC ACTGTTGAAG TGGTGATGAC CATCCTCCAC
GCGGGCGGAA AGTTTGGTGG AAGTGGGTAC GCGGTCTCCG GTGGTTTGCA CGGTGTTGGT
ATTTCCGTGG TGAACGCGTT GTCGTCACGT GTGGAGACAG TCATCCGTCG CGATGGCTAC
ACCTGGCACC AGTCCTTTGC TGATGGTGGA AAACCAGTTG GTGAGTTGCG TCAAGGTGAG
CCCACAGAAG AGAAGGGGAC GACTCAAACC TTCTGGCCTG ACGCTGACAT CTTTGAAACA
GTTGATTTTG ATTTTGAAAC GCTGCGTGCC CGATTCCAAC AGATGGCGTT CCTCAATAAA
GGTCTGTCCA TCACGTTGAC GGACAAACGA CCAGACCACG CTGATGTGTC TGGCGATGAG
GTCGCTGGTG GAGATAACTC CCCCACCTCA GAACGCATCA AAACTGTGAC CTATAAGTAT
GACGCTGGGT TGCTGGACTA TGTGCACCAC CTCAACACCG CGAAGCGAGT TGAGGTCATT
CATGATGAGA TCATCGACTT CGACGCGGAA GACACTGATC GCAAGATTTC TGTGGAGATC
GCGATGCAGT GGACAACGGC GTACTCGGAG TCGGTGCACA CCTACGCGAA CACGATTTCT
ACGACGGAGG GCGGTACCCA CGAGGAAGGG TTCCGAGCGG CTCTCACATC TCTGATTAAC
CGGTATGCAC GCGCAAAGAA CATCCTCAAG GAAAAGGATG ACAATCTCAC GGGAGAGGAC
ATCCGTGAAG GATTGACTGC CGTGATTTCA GTGAAGCTGG GTGAACCACA GTTCGAAGGG
CAAACAAAAA CAAAACTGGG GAACACTGAA GCACGTACCT TTGTGCAGTC GATCATGAAT
GAAAAAATGA ACGACTGGCT TGATGCACAC CCCAATGAAG CCAAAGAGAT CATTCGCAAA
GCTATCCAGG CTTCTCAGGC CCGACTCGCA GCTCGGAAAG CGCGCGAAGC GACCCGCCGG
AAGGGTCTGT TGGAATCGGG GGGCATGCCC GGAAAGCTCC GTGACTGCCA ATCTAACCGT
CCCGAAGAGT GTGAAATTTA CATTGTGGAG GGTGACTCTG CGGGTGGGTC CGCAGTTCGT
GGACGTAACC CCCACATACA AGCGATCTTG CCGTTGCGTG GGAAGATCCT CAACGTTGAA
CGTGCCCGCC TCGATAAGGC ACTGTCGAAC GCTGAGGTGC AAGCACTCAT CACGGCGTTT
GGTACCGGGA TCGGTGAGGA CTTTGACATG TCTAAGCTGC GGTACCACAA GATTGTGCTC
ATGGCCGACG CTGATGTGGA TGGCCAGCAC ATTTGCACGT TGCTCCTCAC CTTGTTGTTC
CGTTACATGC GTCCCCTCAT TGAGCACGGG CACGTGTTCC TTGCTCAACC GCCGTTGTAT
CGGATTAAGT GGACGAACGC CGAGCACGAC TATGTGTTCT CTGACAAGCA GCGTGATGAC
TGTATCCGTG AGGGTTTGGC TGCGGGGAAA CGTATTCCGA AAGACAACGG AATCCAGCGG
TATAAGGGTC TGGGTGAAAT GGACTACTCC GAATTGTGGG ACACCACAAT GGACCCAGAA
CACCGCACTT TGCTGCAGGT GACTTTGGAA GATGCCGCAG CTGCAGACGA AATGTTCGCG
ATCCTCATGG GTGAGGACGT GGAATCGCGA CGTAACTTCA TCCAACGCAA TGCACGGGAT
GTCAGATTCC TCGACATTTA G
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| Protein sequence | MAELNTTATD PNTPTQSVSP AQHQGAYDAN AITVLEGLEA VRKRPGMYIG STGERGLHHL
VYEVVDNSVD EALAGHCDTI NVTILEDGAL EVSDNGRGIP VAIHPTEGRP TVEVVMTILH
AGGKFGGSGY AVSGGLHGVG ISVVNALSSR VETVIRRDGY TWHQSFADGG KPVGELRQGE
PTEEKGTTQT FWPDADIFET VDFDFETLRA RFQQMAFLNK GLSITLTDKR PDHADVSGDE
VAGGDNSPTS ERIKTVTYKY DAGLLDYVHH LNTAKRVEVI HDEIIDFDAE DTDRKISVEI
AMQWTTAYSE SVHTYANTIS TTEGGTHEEG FRAALTSLIN RYARAKNILK EKDDNLTGED
IREGLTAVIS VKLGEPQFEG QTKTKLGNTE ARTFVQSIMN EKMNDWLDAH PNEAKEIIRK
AIQASQARLA ARKAREATRR KGLLESGGMP GKLRDCQSNR PEECEIYIVE GDSAGGSAVR
GRNPHIQAIL PLRGKILNVE RARLDKALSN AEVQALITAF GTGIGEDFDM SKLRYHKIVL
MADADVDGQH ICTLLLTLLF RYMRPLIEHG HVFLAQPPLY RIKWTNAEHD YVFSDKQRDD
CIREGLAAGK RIPKDNGIQR YKGLGEMDYS ELWDTTMDPE HRTLLQVTLE DAAAADEMFA
ILMGEDVESR RNFIQRNARD VRFLDI
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