Gene Jden_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0001 
Symbol 
ID8381839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp159 
End bp1589 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content53% 
IMG OID645002736 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_003159983 
Protein GI256831256 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.40109e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.165841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACTC AAGAAGATAC CTTAACCCTC CTCTGGGAAT CGATCGTCAG AGATCTGGAA 
TACCGCGAGG ATTCCACGCC TCGACTCATT GCATTACTCC GTGGGACGAA GTTGATGGGA
TTTCTCGATG CGACTGCGAT CATCGGTGTC GCAAACGAGG GGCAACGAGA TTTTTTTGAA
CGACGTGGAC GCCAGGAGCT GTCTGAAGCG ATCTCGCGCG CAATGGGTAA GCCCATCACC
ATTGCTGTCA CAGTCAACCC AGATCTGGAA CGTTCCAGTG TCGTGTCTGC GCCTGCGACC
AGCCCTCACA CACAGGATTC AGCACCGACT CCTGATGCTC CACGCTCACT CGTGGACCGT
GAACCAGTTG TCCCCAAGTC GCTCGACGAA GGGCATCGAC TCAACCCCAA GTACATCTTT
GAAACGTTTG TTATTGGTTC ATCGAACCGA TTTGCTCACG CTGCCGCGGT TGCTGTTGCC
GAAGCTCCCG CAAAGGCCTA CAACCCTTTG TTTATTTACG GCGGCTCTGG ACTGGGAAAG
ACTCACCTGC TCCACGCTAT TGGTAACTAT GCGCTCAATC TCTATCCCAG TGCCAAGGTG
AAGTATGTGA ACTCCGAAGA GTTCACCAAT GACTTCATCA ACTCGATCCG TGACGAAAAG
GCGGGCGCAT TCCAGCGCCG TCACCGGGAG GTCGATTTCC TTCTCATTGA TGACATCCAG
TTCCTTCAAG GCAAAGAAGC AACGATGGAG GAGTTCTTCC ATACGTTCAA CGCCTTGCAC
AATGCGAACA AGCAGGTAGT CATCACCTCT GACCTTCCAC CGAAACAGTT GGCTGGTTTT
GAAGATCGGT TGCGTTCCCG CTTCGAGTGG GGACTGATCA CCGATGTGCA GCCTCCTGAT
CTGGAAACAC GCATCGCTAT TTTGCGGAAG AAGGCTGCTG GCGAACGACT CAACGCTCCA
GATGATGTGT TGGAGTACAT TGCCTCTCGG ATCTCATCAA ACATCCGTGA GTTGGAAGGC
GCGTTGATCC GTGTCACTGC TTTTGCGAAC TTGAATCGGC AACCAGTTGA TCGTCAGCTC
GCTGAGATCG TGTTGAAGGA TCTTATTACT GACGATGATG GCGAAGGAGC ACAGATCACG
GCAAGCTCCG TCATCGCACA AACCGCTGCC TACTTTGGTT TGACCATCGA AGACCTGTGC
GGGGCTTCGC GTTCCCGGGT TCTTGTCACA GCACGGCAGA TAGCGATGTA CCTGTGCCGA
GAGTTGACGG ACCTCTCGCT ACCTAAAATC GGAGCACAGT TCGGTGGTCG TGACCACACA
ACAGTGATGC ACGCTAACCG TAAAATCGCG GAACAAATGG CTGAGCGCCG ATCAATTTAC
AACCAAGTGA CCGAGCTCAC CAGCCGCATT AAGTTGGAGC ATCGCGGCTA A
 
Protein sequence
MTTQEDTLTL LWESIVRDLE YREDSTPRLI ALLRGTKLMG FLDATAIIGV ANEGQRDFFE 
RRGRQELSEA ISRAMGKPIT IAVTVNPDLE RSSVVSAPAT SPHTQDSAPT PDAPRSLVDR
EPVVPKSLDE GHRLNPKYIF ETFVIGSSNR FAHAAAVAVA EAPAKAYNPL FIYGGSGLGK
THLLHAIGNY ALNLYPSAKV KYVNSEEFTN DFINSIRDEK AGAFQRRHRE VDFLLIDDIQ
FLQGKEATME EFFHTFNALH NANKQVVITS DLPPKQLAGF EDRLRSRFEW GLITDVQPPD
LETRIAILRK KAAGERLNAP DDVLEYIASR ISSNIRELEG ALIRVTAFAN LNRQPVDRQL
AEIVLKDLIT DDDGEGAQIT ASSVIAQTAA YFGLTIEDLC GASRSRVLVT ARQIAMYLCR
ELTDLSLPKI GAQFGGRDHT TVMHANRKIA EQMAERRSIY NQVTELTSRI KLEHRG