| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3494 |
|---|
| Symbol | |
|---|
| ID | 8379199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 3941703 |
|---|
| End bp | 3942383 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645002735 |
|---|
| Product | thymidylate synthase, flavin-dependent |
|---|
| Protein accession | YP_003159982 |
|---|
| Protein GI | 256831254 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1351] Predicted alternative thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA TTGATCCGTG TTTTTCCTTC ATGCACCTGC CCGACGGCGA GTTTGTCCTG
AGCCACCTCG AACTGGCGGC CCGGACCTGT TACAAATCCG AAGACAAATC CAGCCCGGAT
TCGGCCCGCA AGCTTCTCTC CCGCATCGTG CGTCTGGGCC ATGACAGTGT TTTGGAGCAC
ATCAGCGTTA CAGTTCGTAT CGTCTGCGAC AGGGGCGTGA CCCATGAACT GGTCCGCCAC
CGTCTGTGCG CCTTTTCGCA GGAAAGCACC CGCTACGCCA ACTACGCCCA GGACAAGTTC
GGTCGCGAGA TCACGGTGAT CCGTCCATTT TTCTGGGCCG AGGATGACGC CCGTTACGCA
TTGTGGCTGT CCGCCATGCA GGCTTGCGAG GACGCCTATC TGCGTCTGGT CGATGCCGGG
GCCACGGCAC AGGAGGCCAG AAGCGTCCTG CCCAACAGCC TCAAGACCGA GATCGTGACT
ACGGCCAACA TCCGGGAGTG GCGACACATT TTCAAGTTGC GTTGCGACAA GGCTGCCCAC
CCCCAGATGC GCCAGGTCAT GCTCCCGCTG ATGAGCGCAT TTCAGCAACG CATTCCCCTG
CTTTTCGACG ATCTGGGAGA GCGTTTTGCC GAGGCCCTCG CCGAACTGGA CTCCCAGGGT
GCCGCCGCCC GCTTGTACTG A
|
|---|
| Protein sequence | MKVIDPCFSF MHLPDGEFVL SHLELAARTC YKSEDKSSPD SARKLLSRIV RLGHDSVLEH
ISVTVRIVCD RGVTHELVRH RLCAFSQEST RYANYAQDKF GREITVIRPF FWAEDDARYA
LWLSAMQACE DAYLRLVDAG ATAQEARSVL PNSLKTEIVT TANIREWRHI FKLRCDKAAH
PQMRQVMLPL MSAFQQRIPL LFDDLGERFA EALAELDSQG AAARLY
|
|---|
| |