Gene Dbac_3471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3471 
SymbolflhA 
ID8379176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3917436 
End bp3919523 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content61% 
IMG OID645002712 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_003159959 
Protein GI256831231 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACAC GCACCGAGGC CATGACCATC AATTACAAAC GCTTTACCCG CCAGGGAGAC 
ATCCTGCTGG CCGGTGGCGT TGTCATGACC CTCTTTGTCA TGCTGGTGCC ATTGCCGACC
ATCATTCTCG ACATTCTGCT GGCCTTCTCC ATCTCTTTCT CGCTGGTCAT CCTCATCACC
TCGATGTTCA TGACCTCACC CCTGGAATTT TCGATCTTCC CGTCGGTCCT GCTCGTGACC
ACGCTCCTGC GTCTGGCGCT GAACGTGGCT TCGACCAGGC TCATCCTGCT CAACGGAGAC
CAGGGAACTG CCGCCGCGGG CAAGGTCATC GAAGCCTTCG GACAATTTGT GGTCGGGGGC
AATTTTGCCA TCGGCGCAGT TATTTTCCTG ATCCTCTTCA TCCTGAACAA GACCGTCATC
GTGGCCGGCA CGACCCGCAT CGCCGAAGTC GCGGCCCGCT TCACCCTGGA CGCCATGCCC
GGCAAGCAGA TGGCCATCGA GGCCGATCTG AACGCCGGGC TCATCGACGA GCAGCAGGCC
ATCAAGCAAC GCGAGAACCT GCGCCGGGAG GCGGACTTCT ACGGCGCCAT GGACGGCGCA
GGCAAGTTCG TCTCCGGAGA CGTCAACGCG GGCATGTTCA TCACGTTCAT CAATATCGTG
GGCGGCATCT TCATCGGCGT GCTGCAAAAA GACATGAGCT GGATGGAAGC GGCCCAGACC
TTTTCCCTCT TGACCATTGG CGACGGCCTG GTCTCGACCA TCCCGTCGCT CATCACCTCC
ACCGCGGCCG GTCTCATTGT CAGCCGGGCG GCGGCCGAAG CGCGCATGGG CGAGGAATTC
ATCGGTCAGC TGACCAACCA CCCCAAGGCC CTGCGGCTGG TCTCCGGCGT GCTGCTGCTC
TTCGCCATAG TCCCGGGCAT GCCTACTATA GCCTTTTTGA CCCTCTCCGT AATACTCTTC
ATGGTGGCTC TGTTCGCCGA CCGCATCAAA GCCGAAAACA AGTTGCCGGA GACCGATAAA
AAGAAGAAAG GCGCTACCCC CGACAGCCCG GAAGAAGTGC AGGCCCTGTT GCCGCTCGAT
ATCATGGAGC TTGAGGTGGG CTACGGCCTT ATCCCGCTGG TGGACGAAGA CCAGAACGGC
AACCTGTTGG CCCGCATCCG CTCCATCCGC CGCCAGTTCG CCCTCGACAT GGGCGTCATC
GTGCCGTCAC TGCATCTGCG CGACAACCTG CAGCTCAAAC CCGGCGAGTA CGTGGTCCAG
ATCAAGGGCA ACCGGGTGGC TTCGGCCGAG ATCATGATCG ACCATTTCCT GGCCATGGAC
CCCGGCGACG CGCGCCATGC CATCAAGGGC ATCGAAACCC TGGAGCCGGC CTTCAACCTT
CCGGCGCTGT GGATTCCCGA CGCCAAAAAG GACGAGGCCG TCATGGCCGG CTACACGGTG
GTCGACCCGT CCACAGTCAT CGCCACGCAC CTGACCGAGG TCTTCAAGCA GAACCTGCAT
GAATTCCTGG GCCGCCAGGA AGTTCAGGCT CTGCTGGACA ACCTGTCCCA GCGCGCGCCC
AAGGTCGTGG AAGAGCTGGT GCCGGGCGTC CTGTCACTTG GCGTTCTGCA AAAGGTATTG
CAGAATCTGG TCCGCGAAAA TGTGTCCATC CGCGACCTCT TGTCCATCGT GGAGTGCCTG
GCCGACTACG GTCATTCCGT GAAAGACGCG GATCAGCTGA CGGAGTTTGC GCGCCAACGC
CTTTCCCGCA CCATCATCAA GCCGTATCTG GGTACCGGCA ACCTGTTGCC CATCATCTCC
CTGTCGCCGT CCATAGAGAA CACGTTTCAG GAGAGCATCA AACGCACGGA CAACGGCTCG
TACCTGGCCA TGGAACCGGG CATCGCGCAC AAGATCATCC AGGCCATCAA CAAGGCGGCG
GAAAAGGGCA TCGTGGCCGA GGGGCAGCCC GTGCTGCTGA CCTCCCCGCT CATCCGCCAG
CACCTGTCCC AGCTCCTGGC CCGTTTTTTG CCAACCATGC CTGTCATCTC GCAGGCGGAA
ATACCGGCGG ACATCAGACT CGAATCCGTA GCCATGGTGG AAATCTAA
 
Protein sequence
MATRTEAMTI NYKRFTRQGD ILLAGGVVMT LFVMLVPLPT IILDILLAFS ISFSLVILIT 
SMFMTSPLEF SIFPSVLLVT TLLRLALNVA STRLILLNGD QGTAAAGKVI EAFGQFVVGG
NFAIGAVIFL ILFILNKTVI VAGTTRIAEV AARFTLDAMP GKQMAIEADL NAGLIDEQQA
IKQRENLRRE ADFYGAMDGA GKFVSGDVNA GMFITFINIV GGIFIGVLQK DMSWMEAAQT
FSLLTIGDGL VSTIPSLITS TAAGLIVSRA AAEARMGEEF IGQLTNHPKA LRLVSGVLLL
FAIVPGMPTI AFLTLSVILF MVALFADRIK AENKLPETDK KKKGATPDSP EEVQALLPLD
IMELEVGYGL IPLVDEDQNG NLLARIRSIR RQFALDMGVI VPSLHLRDNL QLKPGEYVVQ
IKGNRVASAE IMIDHFLAMD PGDARHAIKG IETLEPAFNL PALWIPDAKK DEAVMAGYTV
VDPSTVIATH LTEVFKQNLH EFLGRQEVQA LLDNLSQRAP KVVEELVPGV LSLGVLQKVL
QNLVRENVSI RDLLSIVECL ADYGHSVKDA DQLTEFARQR LSRTIIKPYL GTGNLLPIIS
LSPSIENTFQ ESIKRTDNGS YLAMEPGIAH KIIQAINKAA EKGIVAEGQP VLLTSPLIRQ
HLSQLLARFL PTMPVISQAE IPADIRLESV AMVEI