| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3448 |
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| Symbol | |
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| ID | 8379149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3890370 |
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| End bp | 3892928 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645002685 |
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| Product | cobyric acid synthase CobQ |
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| Protein accession | YP_003159936 |
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| Protein GI | 256831208 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1492] Cobyric acid synthase |
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| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ
[TIGR01140] L-threonine-O-3-phosphate decarboxylase
[TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACTC TTCCCGCCCA CGGCGGCAAT ATCCGCTCCA TGGCCTCGGC GCTTGGTTGC
GCTCCGGAAG AAATTCTGGA CTTTTCGGCG AACATCAACC CACTTGGGCC GCCCGCATGG
CTGCGACCCG TGGTGGCCCG CGCCCTGGCC GGGACGGCCC ATTATCCCGA ACCACGGGCA
GAAGGGCTGC GCCGGATCGC CGCCACGCGC ATGGGCGTTG CGCCCGAAAA CGTCGTCGCC
GGCAACGGTT CGTCCGAACT GCTGTATGCC CTGCCCAGGG TTTGCGCGGC CAGGGGCCTT
GGGCGCGCAG TGCTGCCCGT GCCCTGCTAC GGGGACTATG CGCGGGCTTG CGAAGCGGCC
GGGCTTTCCT GCGAAACCCT GACACTGCAT CCCGAAACCG GCTTCGCCAT GGAGTGGTCG
AAACTTGAGG AGATGCTAAG CAAGCCGGCG CTGGTCATTC TCGGTCAGCC CGGAAACCCG
GCCGGCACCC TGCTCGAACC GCAGCGTATT CTGGATCTGG CCGCCCGGCA CCCCAAGAGC
TTCTTTCTTA TTGATGAAGC GTTCGCTGAT TTTGTGCCGC AGCTGTCCCG GCTTGGCGCG
ACGGTTCGTC CAAATCTGTT TGTGCTGCAT TCCCTGACCA AATTTTACGC CGTGCCGGGA
CTGCGTCTGG GTCTTGGGTA TGGGAGCGGT GAGGTGTGCG CGGCGCTTGC GGCCTTGCTG
CCGGACTGGA GCGTCAACGC CCTGGCCCAG GCCGTGGGCG TCGATGCCTT GCGTGACGAC
GCCTACGCCA GGCAGACCAT GGACGCGGTG AAGGCGCTGC GGAGCGATTT GGCAGCAGCC
CTCACGGGGC TCGGGGTGAG AGTGTTTCCG GGCAGCGCCA ACTATCTGCT CTGCCGCAGC
GAAAATCCGG ACGCCTTTGC CTTGCAGGAG AAGCTCGCCA AGAGCCGCAT CCTGATCCGC
AACTGCGCCA ATTATGAGGG CCTCGATGCC CGCTATTTCC GGGTGGCCGT GCGCGGTGTC
GAGGAGAACG GGCGATTGGT GCAGGCTCTT TCAGAAATTT TCGAGTCGGC AAAACCCCGG
AGCCGTTCCG TGCGCAAAAC CCCGGCCATC ATGCTGCAGG GACTCTCGTC CAACGCGGGC
AAGTCGGTCC TGACCGCGGC GCTGTGCCGG ATTATCCTGC AGGACGGGCT TTGCGTCGCT
CCATTCAAGG CGCAGAACAT GTCGCTCAAT TCCTTTGTGA CCAGGGGCGG TGGCGAGATG
GGGCGTGCCC AGGTCCTGCA GGCCCAGGCC TGTCGGCTGG AGCCGGACGT GCGCATGAAT
CCGGTGCTTT TGAAGCCCAA TTCGGAGACG GGTTCCCAGG TCATCGTGCT CGGCAAGCCC
GTGGGCAACA TGAGCGTGGG GCAGTACATC CGCTACAAGC CGCAAATCTT CGAGACGATC
ACGCGAGCTT ATGATGAGCT GTCCGCCTCG GCCCAGCTCA TGGTGCTGGA GGGCGCGGGC
AGTCCGGCCG AGGTCAATCT CAAATCCCAT GATGTGGTCA ACATGCGCAT GGCCCGGCAC
GCCGGGGCCA GGGTGCTTCT GGCCGGCGAC ATCGACCGGG GCGGGGTCTT TGCCTCCTTT
GTTGGGACCA TGGAGGTCAT GGAGGAGTGG GAGAGGGCCC TGGTGGCAGG GTTCATCGTC
AATCGTTTTC GGGGCAGGCA GGATCTGCTT GGGGACGCCA TCGACTATGT GCGCCGTTTT
ACCGGAATCG AGACGTTGGG CGTGGTGCCA TTTCTGCAGA ATCTGGGATT GCCCGAAGAG
GATTCGGTCA GTTTCAAGGA AGCTCGGCCG CAGGGCGGAA ACGCCGAGCT TCGCATCGTG
GCCGTGGACC TGCCGCACAT TTCAAACTTC ACGGATCTCG ATGCCCTGGG GCTTGAGCCG
GACGTGGATT TGCGCATCGC CCGCGCCCCC CATGACTTGG CTGGAGCCGA CGCCATTATT
CTGCCGGGTT CGCGCAATGT GTTCGCGGAT CTGGACTATC TGTGGAGTTC GGGCCTGGCC
CAGGCTGTGC TGGCCAGCCG GGCCGAAATA GTCGGGGTCT GCGGCGGGCT GCAGATGCTC
GGGGCAGGCA TTGCGGATCC GGCCTGCGTC GAGAGCGGGG GCGCTTCGGC CAGGCCCCTT
GGCCTTTTGC CTCTGGCTAC GGAAATGGCC GTGGACAAGG TGTTGTGCCA GGCACGCTGC
GTTTTCCTGC CCTCAGGGGA AGAGGTATGC GGGTATGAAA TCCATCACGG CCACACGCAT
GTGCTGGATG GACAGACCAC GCCTGTCATG GCCCGTACGG ACGGGACAGT GATCGGTTGG
GGGCGTGAAG ACGCGATGGT CTGGGGCACC TATCTGCACG GAGTCTTCGA TGCTGACGGG
TTCCGCCGCT CCTTCCTGGA TCGTTTGCGG GTGCGCAAGG GGCTCGCTCC CCTGAACACG
GTGCAGGTAG CCTATGACCT TGAAGCCGCG CTGGACCGCC TGGCCTTGGT GGTGCGGAAA
AGCCTCGATA TGGAGCGAAT TTATCGCCTT CTGGATTGA
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| Protein sequence | MATLPAHGGN IRSMASALGC APEEILDFSA NINPLGPPAW LRPVVARALA GTAHYPEPRA
EGLRRIAATR MGVAPENVVA GNGSSELLYA LPRVCAARGL GRAVLPVPCY GDYARACEAA
GLSCETLTLH PETGFAMEWS KLEEMLSKPA LVILGQPGNP AGTLLEPQRI LDLAARHPKS
FFLIDEAFAD FVPQLSRLGA TVRPNLFVLH SLTKFYAVPG LRLGLGYGSG EVCAALAALL
PDWSVNALAQ AVGVDALRDD AYARQTMDAV KALRSDLAAA LTGLGVRVFP GSANYLLCRS
ENPDAFALQE KLAKSRILIR NCANYEGLDA RYFRVAVRGV EENGRLVQAL SEIFESAKPR
SRSVRKTPAI MLQGLSSNAG KSVLTAALCR IILQDGLCVA PFKAQNMSLN SFVTRGGGEM
GRAQVLQAQA CRLEPDVRMN PVLLKPNSET GSQVIVLGKP VGNMSVGQYI RYKPQIFETI
TRAYDELSAS AQLMVLEGAG SPAEVNLKSH DVVNMRMARH AGARVLLAGD IDRGGVFASF
VGTMEVMEEW ERALVAGFIV NRFRGRQDLL GDAIDYVRRF TGIETLGVVP FLQNLGLPEE
DSVSFKEARP QGGNAELRIV AVDLPHISNF TDLDALGLEP DVDLRIARAP HDLAGADAII
LPGSRNVFAD LDYLWSSGLA QAVLASRAEI VGVCGGLQML GAGIADPACV ESGGASARPL
GLLPLATEMA VDKVLCQARC VFLPSGEEVC GYEIHHGHTH VLDGQTTPVM ARTDGTVIGW
GREDAMVWGT YLHGVFDADG FRRSFLDRLR VRKGLAPLNT VQVAYDLEAA LDRLALVVRK
SLDMERIYRL LD
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