Gene Dbac_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3389 
Symbol 
ID8379088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp3824427 
End bp3824990 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content61% 
IMG OID645002624 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003159877 
Protein GI256831149 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTGA CCCGGACCGA AATTCCCGGA GTGCTCGTGC TCAAGCCCAA GGTTTTTGGA 
GATCACCGCG GTTTCTTTTG CGAAACTTAC AGCCGTCGCC AGCTGATCGC GCACGGCCTG 
GATGTCGATT TCGTGCAGGA CAACGAGGCT TTTTCCGCGC AGGCCGGGGT GCTGCGCGGT 
TTGCATTTTC AGACCCCTCC GATGACCCAG GCCAAACTGG TGCGGGTGGG GCGGGGCGCT 
GTGTACGATG TGGTGGTCGA TCTGCGCACG GGTTCCCCCA CCTTTGGCCG CTGGCAGGGC 
TTCACCCTCT CGGCCGCGAA TTTCTTACAA CTTTTCATCC CCGCGGGCCT CGCGCACGGG 
TACATGACCC TGGAGTCCGA CACGCAATTT CTCTACAAGG TCGACCAGTA CTACTCGCCG 
GAGCATGATG GCGGGATCTC GTGCCTGGAT CCCGTTTTGG GCATTGACTG GCCCGACCTG 
CCGCCGATCA TGTCCGACAA GGACGTGCGA TTGCCGTGTC TTGCGGATTT CAGTTCGCCC 
TTCCGCATGG AGGGCGCTGG CTGA
 
Protein sequence
MDVTRTEIPG VLVLKPKVFG DHRGFFCETY SRRQLIAHGL DVDFVQDNEA FSAQAGVLRG 
LHFQTPPMTQ AKLVRVGRGA VYDVVVDLRT GSPTFGRWQG FTLSAANFLQ LFIPAGLAHG 
YMTLESDTQF LYKVDQYYSP EHDGGISCLD PVLGIDWPDL PPIMSDKDVR LPCLADFSSP 
FRMEGAG