Gene Dbac_3366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3366 
Symbol 
ID8379062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3799873 
End bp3801282 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content55% 
IMG OID645002599 
ProductATP synthase F1, beta subunit 
Protein accessionYP_003159854 
Protein GI256831126 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCTG TTAATACCGG TAAAATAGTG CAGGTCATTG GACCTGTTGT TGACTTGGAG 
TTTGCCGAAG GCAACCTTCC AAGTATTTTG AACGCTGTTC TCATTACGAA CCCGACCATT
GATGCCGAAG AAGACAACCT GGTTGTTGAA GTCGCGCAGC ATCTTGGCAA CAGCGTTGTC
CGCTGCATCG CCATGGACAA CACTGACGGC TTGGTTCGCG GCCAGATCGG CAAGGACACG
GGCAAGCCTA TCCAGGTACC CGTCGGCAAG GCTTCCCTGG GACGAATTCT GAACGTCGTA
GGCCGCCCCG TGGATGAAAA GGGTCCCATC TCCTCCGAGA AGATGTACCC CATCCATCGC
CCTGCTCCCG GATTCACCGA ACAGTCGACC AAGATTGAAG TGCTGGAGAC CGGCGTCAAG
GTTATCGACC TGCTCGTACC TTTCCCCAAG GGCGGAAAGA TGGGCATGTT CGGTGGTGCG
GGCGTTGGCA AGACCGTTAT TCTCATGGAA ATGATCAACA ACATCGCCAA GAACCACGGT
GGTATTTCCG TGTTCGCGGG TGTTGGCGAG CGCACACGTG AAGGTAACGA CCTTTATCAT
GAAATGATCG AAGCCGGGGT TCTGGATAAA GCCTGCCTCG TCTACGGTCA GATGAACGAA
CCTCCGGGAG CCCGTTCCCG CGTTGCGCTG ACCGCTCTGG CTGCCGCGGA ATACTTCCGT
GACGAAGAAA ACCAGGACGT GCTGCTCTTC GTAGACAACA TCTTCCGTTT CACCCAGGCC
GGCTCGGAAG TCTCCGCGCT TCTTGGCCGC ATGCCTTCCG CGGTTGGTTA CCAGCCGACG
CTGGGTACCG ACCTTGGTGA GCTGCAGGAA CGTATTACTT CCACCAAAAC GGGTTCCATC
ACCTCGGTTC AGGCCGTTTA CGTCCCTGCC GATGACTTGA CCGACCCCGC TCCTGCAACA
ACCTTCTCGC ATCTTGACGG AACCATCGTT CTTTCCCGTC AGATCGCAGA GCTTGGTATT
TACCCTGCAG TGGATCCTCT TGACTCCACT TCGCGCATTC TGGATCCCAA CGTCATCGGC
ATGGACCACT ACATGACTGC CCGTGCTGTG CAGCGTCTGC TTCAGAAGTA CAAGGATCTG
CAGGATATCA TCGCGATTCT GGGTATGGAC GAACTGTCTG ATGAAGATAA GCTGTCCGTT
TCCAGAGCAC GCAAGATTCA GCGATTCCTG TCCCAGCCTT TCTTCGTTGC AGCCCAGTTT
ACCGGCAAGG AAGGCCGCTA TGTGAAGCTC GAAGAGACCA TCAAGAGCTT CAAGGAAATC
ATTGAAGGCA AGCACGATTC CGTTCCGGAG TCCTGCTTCT ACATGGTAGG CGGACTTGAA
GAGGCATTGG AAAACGCCAA GAAACAGTAA
 
Protein sequence
MSAVNTGKIV QVIGPVVDLE FAEGNLPSIL NAVLITNPTI DAEEDNLVVE VAQHLGNSVV 
RCIAMDNTDG LVRGQIGKDT GKPIQVPVGK ASLGRILNVV GRPVDEKGPI SSEKMYPIHR
PAPGFTEQST KIEVLETGVK VIDLLVPFPK GGKMGMFGGA GVGKTVILME MINNIAKNHG
GISVFAGVGE RTREGNDLYH EMIEAGVLDK ACLVYGQMNE PPGARSRVAL TALAAAEYFR
DEENQDVLLF VDNIFRFTQA GSEVSALLGR MPSAVGYQPT LGTDLGELQE RITSTKTGSI
TSVQAVYVPA DDLTDPAPAT TFSHLDGTIV LSRQIAELGI YPAVDPLDST SRILDPNVIG
MDHYMTARAV QRLLQKYKDL QDIIAILGMD ELSDEDKLSV SRARKIQRFL SQPFFVAAQF
TGKEGRYVKL EETIKSFKEI IEGKHDSVPE SCFYMVGGLE EALENAKKQ