Gene Dbac_3355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3355 
Symbol 
ID8379051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3788970 
End bp3789923 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content60% 
IMG OID645002588 
Producthypothetical protein 
Protein accessionYP_003159843 
Protein GI256831115 
COG category[R] General function prediction only 
COG ID[COG1242] Predicted Fe-S oxidoreductase 
TIGRFAM ID[TIGR01212] radical SAM protein, TIGR01212 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.378299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCACA ACAGATTCTA CCGACTGTCA CTCTACTTCA AGCAGCGCTT TGGCCAACGG 
GTCCGTAAAA TTCCGCTGGA CGCCGGCAGC TCATGCCCAA ACCGGGACGG CACCCTGTCC
CGCAGCGGCT GTGCGTTCTG CAATCAGAAG GGGACCGGAA CCGGCCTGGC CGAGGCCGGC
ATGTCCTTGC GTCATCAATA TTTCGCGTAT CGGGAGTTAT CCCGGGACCG CGACACGGAC
ACGCGCTTTC TGGGATATCT CCAGTCTTTC TCCAACACCC ACGGGCCTGC GGAACGGTTG
CGGGCGCTGC TGCAGGAACT GGCTGGGCTG CCGGACCTCG TCGGCCTGGC CATCGGCACC
CGGCCGGACT GCCTTGACGA GGAAAAACTG GATATCCTGC GCAGTGCGCC TTTCGAAGAA
CTCTGGCTGG ACCTGGGCCT GCAGTCCGCG CAAGACAGCA CCCTGCACCG CATCAACCGC
GGACATGACG CAGCGTGCTT CGCCACGTGG GCCCAAAAAG CCGCGGAACG GGGAATCAAG
GTTTGCGCCC ATGTCATCAC CGGCTTGCCG GGGGAGAATT TGGCGGACTT CGAACAAACC
ATTCTCTTTG TCAACAGCCT GCCGGTGTCC GGCATAAAAA TACATAATCT GTATATCTGC
CGGGACACGC CCCTGGAATC CGCCTGGCGC GCCGGGTCGA TCGCACTGCT CTCGCAGGAG
GAATCCCAGA CCTGGCTTGT GCGGGGAATT GCCCTGCTGC GGCAGGATAT CGTGATTCAC
CGCATAAACA GCGACCCCGA ACAGGACGAA CTGCTCGCCC CTTTGTGGGC CATGAAAAAA
ACCGCCTACT TAAACGCGGT CAAACAGCAC CTGCATGACA CGGATACATG GCAAGGCAAG
GCCCTGGGGC AAAAACGCCC GGAGTGGATG AACCCTCAAA AGGAAAAAAC ATGA
 
Protein sequence
MSHNRFYRLS LYFKQRFGQR VRKIPLDAGS SCPNRDGTLS RSGCAFCNQK GTGTGLAEAG 
MSLRHQYFAY RELSRDRDTD TRFLGYLQSF SNTHGPAERL RALLQELAGL PDLVGLAIGT
RPDCLDEEKL DILRSAPFEE LWLDLGLQSA QDSTLHRINR GHDAACFATW AQKAAERGIK
VCAHVITGLP GENLADFEQT ILFVNSLPVS GIKIHNLYIC RDTPLESAWR AGSIALLSQE
ESQTWLVRGI ALLRQDIVIH RINSDPEQDE LLAPLWAMKK TAYLNAVKQH LHDTDTWQGK
ALGQKRPEWM NPQKEKT