| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3329 |
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| Symbol | |
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| ID | 8379025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3765601 |
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| End bp | 3766338 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645002562 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003159817 |
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| Protein GI | 256831089 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.346808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGACA CTGAGCTTGT TGAAATCCCG GTGCTGCACC GGGATGAACA CCTCATCGCC
GTGCACAAAC CCGCCGGACT GCTTGTGCAC CGCAACGCCC ACGCCGGACG CGAACCCTTT
CTGCTGCAGA TCCTGCGCGA CCAGCTCGGC CAGCGCCTCT ATCCGGTGCA CCGCCTGGAC
CGCCCCACTT CCGGCCTCAT GATCATGGCC CTCTCGCCGC AGGCCGCCCA CGCGCTGGCC
CTCCAGTTCG CGAGCCAGGA AGTTCATAAA ACCTATCTTG CCGTGACGAG GGGATTCGTT
CCTCCCCAAG GTCTCATCGA CGATGCGCTC AAATCCGAAT CCGGCAGCCT GCAGGAGGCC
CGAACCGAAT TCACGCGCCT GGCCACGGCG GAAATCCCGC ACCCGGTCGG CCCAAACCCC
ACCGCCCGCT ACAGCATGGT CCGGGTTCGC CCCAGGACCG GCCGCACCCA CCAGATCCGC
CGCCACTTCG CCCACATCCG CCACCCGCTC ATCGGCGACG TGTTGCGCGG GGACGGCCGG
CAGAACCGCT TCTTCCGCGA CCATTTCGGC CTGCACCGCC TGCTGCTGGC CAGCGTGGAA
CTCACCTTCC GCCACCCCGA AGACACCAGT CCTATGACCT TGACCTGCCC CCCTGCGCGG
GAACTCCTCG ATCTTTTCGG CCAGCTGGGC TGGAACGCCG CCATCGACGC TTTCAACGTC
CAAACCAACA CGCGCTGA
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| Protein sequence | MPDTELVEIP VLHRDEHLIA VHKPAGLLVH RNAHAGREPF LLQILRDQLG QRLYPVHRLD
RPTSGLMIMA LSPQAAHALA LQFASQEVHK TYLAVTRGFV PPQGLIDDAL KSESGSLQEA
RTEFTRLATA EIPHPVGPNP TARYSMVRVR PRTGRTHQIR RHFAHIRHPL IGDVLRGDGR
QNRFFRDHFG LHRLLLASVE LTFRHPEDTS PMTLTCPPAR ELLDLFGQLG WNAAIDAFNV
QTNTR
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