| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3268 |
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| Symbol | |
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| ID | 8378964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3700914 |
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| End bp | 3702803 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645002503 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_003159758 |
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| Protein GI | 256831030 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGC CCCGGCTGCT GGCGAATAAA AACCTCTACC TCATGCTCCT CGGCGAGAGC
GGTCTCTTTG CCATGGCTCT GGTCATGGCT TTTTTGCTGC GTTTCGAGTT TGACATCCCG
GCGGATTTTT TCCGGCAGAT GGTAGGGCTT TTGCCGGTGG CCGTGGCTCT CAAAGTGGTC
TTCTTCTGGG TCTGCGGGCT GTATCGGGGC ATGTGGCGCT ATACCGGCCT GGCCGATCTG
TGGAAGATCG GGCGCGCGGT GTTCATGGCT GAGGTGGCGC TGATCATCTA CGTCGCGTTT
ACGTCGCATT TTCAGGGCTA TCCGCGCTCC GTGTTTATCC TGGATCCGTT GCTGGCCTTT
GTTTTTGCTT GCGGAGCCCG GGTGCTGATC CGTTCCCTGT ATGAGACTTC CGCGCAGCCG
AAAGACTGGC TGTTTGCGCT GCTACCTGAA AGGTTCTGCG CTCCCGCCTC CGGGATACGG
GCGCTCATTG TCGGGGCTGA CGCGGATGGC GCGCGCATCG CCAAGGAAAT TTTGGATGTC
CGCGATTCCG GACTGCATCT GGTGGGTTTT GTTGATGACG ACCCCGCCCG CATCGGGCGC
AATATCCATG GCCTGCCCGT ATATGGGCCG CTGGCGGCGC TGGTGAGCGT GGCCCAGATG
ACCCGCGCCG AGGAAATTTT GGTCAGCGCG GGCCAAGCGG GTGGCCATCT GCGCGAGATC
GTGGATGCCT GCGAGTCCGC CCAGCTCGGC ATCAAGAAAC TGCCCGCCCT GGCCGACATC
GCCAGCGGCA AGGTCTCGGT CAAGGCCCTG CGCGACGTGC GCTACGAGGA TCTGTTGGGG
CGAGAGGAAG TGCACCTGGA CGAGGCCGGG ATCAAGGGCT ACCTCGCGGA CAAGGTGGTG
CTGGTCACCG GGGCCGGGGG CTCCATCGGT TCGGAGCTCT GCCGCCAGAT CATCCGCTTT
GGTCCGCGCC TGCTCGTCCT GTTCGATGCC GGTGAGGAGA ATCTGTACTC CATCGAGATG
GAACTCCTGC ATCAGCACGG GTTCACGCGC TACGTCACGG TGCTGGGGCA GGTGCAGGAC
GCGGCCCTGG TGGACGCGGT TTTCGCGGCC CGGCAGCCGC ATGTCGTGTT CCATGCCGCG
GCCTACAAGC ATGTGCCCAT GCTCGAAGGC AACCCCTGGC AGGCCGTGAC CAACAATATC
GTCGGCTCGC GCACGGTCAT GGAGGCTTCG GTCAGGCATG GCGCAGGGCG TTTCGTGCTT
GTGTCCACGG ACAAGGCTGT GCGTCCGACG AATGTCATGG GCGCGTCCAA GCGCGTGGCG
GAGCTGCTCA TGCATGGCTT CCAGGGCGGG GAGACGACGT TCATGGCCGT GCGCTTCGGC
AATGTGCTCG GCTCGTCGGG CTCGGTCATC CCGCTCTTTC GCAGCCAGAT CGAACGAGGC
GGGCCGGTCA CTGTCACTCA CCCCGAAGTG ACCCGCTATT TCATGACCAT CCCGGAAGCG
GCCCAGCTCA TCGTCCAGGC CGGAGCCCTG GGACGGGGCG GGGAAATTTT CGTACTCAAA
ATGGGCCAGC CCGTACGCAT CGCCGACCTA GCCAGGGACC TTATCATCCT GTCAGGTAAG
GATCCGGCCG AAATTGAAGT GAAGTTCACG GGCCTGCGGC CGGGGGAGAA GCTTTACGAG
GAGCTAATCA CCGCAGGAGA GGGCGTGCTG GAAACCGGGC ATGAGAAGAT CATGGTGTTG
CGCTCCGAAA AAACTCAGAT AGAAAACGAT GAAAAATTAG TGACCCTGCT AGAGGCTGCG
CGGTTTTTTG AAGCTGAGGG GGTCAGACGG GGGCTTCAGG ATTTGGTACC AGAATATACT
CCCGTAAGTA ATGCGGCCGA GGTGCATTGA
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| Protein sequence | MKVPRLLANK NLYLMLLGES GLFAMALVMA FLLRFEFDIP ADFFRQMVGL LPVAVALKVV
FFWVCGLYRG MWRYTGLADL WKIGRAVFMA EVALIIYVAF TSHFQGYPRS VFILDPLLAF
VFACGARVLI RSLYETSAQP KDWLFALLPE RFCAPASGIR ALIVGADADG ARIAKEILDV
RDSGLHLVGF VDDDPARIGR NIHGLPVYGP LAALVSVAQM TRAEEILVSA GQAGGHLREI
VDACESAQLG IKKLPALADI ASGKVSVKAL RDVRYEDLLG REEVHLDEAG IKGYLADKVV
LVTGAGGSIG SELCRQIIRF GPRLLVLFDA GEENLYSIEM ELLHQHGFTR YVTVLGQVQD
AALVDAVFAA RQPHVVFHAA AYKHVPMLEG NPWQAVTNNI VGSRTVMEAS VRHGAGRFVL
VSTDKAVRPT NVMGASKRVA ELLMHGFQGG ETTFMAVRFG NVLGSSGSVI PLFRSQIERG
GPVTVTHPEV TRYFMTIPEA AQLIVQAGAL GRGGEIFVLK MGQPVRIADL ARDLIILSGK
DPAEIEVKFT GLRPGEKLYE ELITAGEGVL ETGHEKIMVL RSEKTQIEND EKLVTLLEAA
RFFEAEGVRR GLQDLVPEYT PVSNAAEVH
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