| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3243 |
|---|
| Symbol | |
|---|
| ID | 8378939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 3673879 |
|---|
| End bp | 3676593 |
|---|
| Gene Length | 2715 bp |
|---|
| Protein Length | 904 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645002479 |
|---|
| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| Protein accession | YP_003159734 |
|---|
| Protein GI | 256831006 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGTT TTAGCGGAAA GCTCTGGCAT CACCTGCCGT CCAAGGATGT GCTGGAGGTT
TTTCAAGTCG ACCCGGGCAA GGGCCTTGAT ACCTTGCAGA TCAAATGGCG AACCGACGAA
TTCGGCCCCA ATGCCCTGAC CACGCGCCGG GGCAAAACCA AACTCGAACG CTTCCTGCTG
CAGTTCCACC AGCCCCTGGT CTACATCCTC GTCGCGGCTG GAATAATCAC TGCCGCCCTG
GGCGAAGTGG TCGATTCCGC CGTCATCGTG GGCGTGGTCC TGGTCAACGC CATTGTCGGA
TACATCCAGG AGGCCAAGGC CGCCGGAGCG CTGGAAGCGC TTGCCAATTC CATGATAACC
GAAGCGGTGG TCATCCGTTC AGGCTCCACC AGGCGCGTGG CGGCTTCGGA ACTGGTCCCC
GGAGACATCG TGGTGCTGCG CTCGGGCGAC AAGGTGCCGG CCGACCTTCG TCTCTTTTCC
ATCAAGGACC TGCGCGTGGA CGAGTCGGCC CTGACCGGCG AATCCGTGCC CGTGGGCAAA
GCCGCGGACG CCCTGCCGCA GGACGCCGTC CTCGGCGACC GCCGCAACAT GGCCTACGCC
TCCACCCTGA TCACCTACGG CCAGGCCACG GGCGTGGTCG TGAGCACCGG CGACTGCACC
GAAATCGGCC GCATCTCGAC CATGGTCTCC GAGGCCGACG AACTGGCCAC TCCGCTGACC
CGCAAGATCG CAAGCTTCAG CCACATCCTG CTCTGGGCCA TCCTGGCCCT GGCCGCCCTG
ACCTTCACCG CCGGCGTGCT GCGCGGCGAG AAAGCCGCCG ACATGTTCAT GGCCGCAGTG
GCCCTGGCCG TGGGCGCCAT TCCCGAAGGC CTGCCCGCCG CGGTGACCGT CATCCTGGCC
ATGGGCGTTT CGCGCATGGC CGCGCGCGGC GCCATCATCC GCAAGCTCCC CGCCGTGGAG
ACCCTGGGCG GAGCCTCGGT CATCTGCTCG GACAAGACCG GCACCCTGAC CGAAAACCAG
ATGACCGTCA CCGCCATCTT CGCGGGCCTT GCAAGCCACG CGGTCAGCGG CGCGGGGTAC
CAGCCCGAAG GGGACATCGA AGGATTCGAC GAGCGCAACC AGGCCCTGCG CACCACGCTC
TTGGCCGGCC TGCTCTGCAA CGACACCAGC ATCGAATATT CGGAAACCGG GGAAAAGGTC
GTCGGCGATC CCACCGAGGC CGCGTTGATC GTGGCCGCCG GCAAGGGCGG CCTGCGGCTG
GACGAACAGT CCCGGAGCCT GCCGCGCATC GACACCCTGC CCTTTGAATC CGAGCACCAG
TACATGGCCA CCCTGCACGA CCAGGGAGCG TCCAGCCCGC GCCTTGTCTT CTTCAAGGGC
TCGGTGGAAA CCGTGCTCGA CCGCGCGGCC ATGGAACTTC ACGCCGACGG CACGCTTCAG
CCCCTTGATC CGGACTCCAT CCGCGCCGAG GTCGAGCGCC TGGGCATGGA CGGCATGCGC
GTCCTGGCCA TGGCCTGCAA GGAATTGCCT GCCGAAATCT CATCGCTCGC GCATGAGCAT
GTCTCTTCCG AACTGATCTT CATCGGCCTC ACGGGCATGA TCGATCCGCC GCGCCCCGAG
GCGGTCCAGG CCGTGCACGC CTTTCACCGC GCAGGGGTCA AGGTCAAGAT GATCACCGGC
GACCACGCGG TCACGGCGGC GGCCATCGGC GTTCAGCTGG GACTCGGCAT CGAGACCTGT
CCCGGCAGCC CGACCTGTCA GGTCATGACC GGCGCGGACA TGTCCCGGAT ATCCGATGAG
GAACTGGTGG CCAAAGCCGC CGACACCGCC GTCTTCGCCC GCGTCGCCCC GGACCAGAAG
CTGCGTCTGG TCATGGCTCT GCAAAGCCGG GGCGAGGTCG TGGCCATGAC CGGCGACGGC
GTCAACGACG CCCCGGCCCT GAAACAGGCC GACATCGGCG TGGCCATGGG CAAGGGCGGC
ACCGAGGCGG CCAAGGAGGC CTCGGACATG ATCCTGACCG ACGACAACTT CGCCACCATC
GAGGCCGCCG TGGAGGAAGG CCGGGGCGTG TACGACAACC TGCTCAAATT CATCGTCTGG
ACCCTGCCCA CCAACGTAGG CGAAGGCCTG GTCATCCTTG CCGCCGTCCT GCTCGGGGTG
GCCCTGCCCA TCCTGCCGGT GCAGATCCTG TGGATCAACA TGACCACGGC CGGATGCCTC
GGCCTCATGC TCGCCTTCGA GCCCAAGGAG CCGGGCATCA TGAACCGCGA CCCGCGCGAT
CCGAGACTGC CCATCCTGGA CACGGAACTC TACATCCGTA TCCTGCTGGT GGGCGGACTC
CTACTTGTCG CCGCTTTCGG CCTCTACGAA TGGGAACTGC GCACCACCGG CGTGCAGGAA
CAGGCGCGTA CCGTAGCCGT CAACGTCTTC GTCATGGTCG AAGCCTTCTA CCTCTTCAAC
AGCCGCTCCT TCACCCGCTC CCCCTTTGCC CTCGGGCTGT GGACAAACCC CTGGGTGGTG
GGCGGATTCG CCATCATGGT CGTCCTGCAG CTCGCCTTCA CCTACGTCCC GTTCATGAAT
GTCCTGTTCG GCAGCGCGCC CATCGGCGTC CTGCCCTGGC TCAAGATCAT CGGCGTTTCG
ATCCTGGCCT TCATCGTGAT CGAGGTCGAG AAATGGCTCC GCAACCGTCC AGCCAAGGCC
GCCGGCCACG CCTGA
|
|---|
| Protein sequence | MDCFSGKLWH HLPSKDVLEV FQVDPGKGLD TLQIKWRTDE FGPNALTTRR GKTKLERFLL
QFHQPLVYIL VAAGIITAAL GEVVDSAVIV GVVLVNAIVG YIQEAKAAGA LEALANSMIT
EAVVIRSGST RRVAASELVP GDIVVLRSGD KVPADLRLFS IKDLRVDESA LTGESVPVGK
AADALPQDAV LGDRRNMAYA STLITYGQAT GVVVSTGDCT EIGRISTMVS EADELATPLT
RKIASFSHIL LWAILALAAL TFTAGVLRGE KAADMFMAAV ALAVGAIPEG LPAAVTVILA
MGVSRMAARG AIIRKLPAVE TLGGASVICS DKTGTLTENQ MTVTAIFAGL ASHAVSGAGY
QPEGDIEGFD ERNQALRTTL LAGLLCNDTS IEYSETGEKV VGDPTEAALI VAAGKGGLRL
DEQSRSLPRI DTLPFESEHQ YMATLHDQGA SSPRLVFFKG SVETVLDRAA MELHADGTLQ
PLDPDSIRAE VERLGMDGMR VLAMACKELP AEISSLAHEH VSSELIFIGL TGMIDPPRPE
AVQAVHAFHR AGVKVKMITG DHAVTAAAIG VQLGLGIETC PGSPTCQVMT GADMSRISDE
ELVAKAADTA VFARVAPDQK LRLVMALQSR GEVVAMTGDG VNDAPALKQA DIGVAMGKGG
TEAAKEASDM ILTDDNFATI EAAVEEGRGV YDNLLKFIVW TLPTNVGEGL VILAAVLLGV
ALPILPVQIL WINMTTAGCL GLMLAFEPKE PGIMNRDPRD PRLPILDTEL YIRILLVGGL
LLVAAFGLYE WELRTTGVQE QARTVAVNVF VMVEAFYLFN SRSFTRSPFA LGLWTNPWVV
GGFAIMVVLQ LAFTYVPFMN VLFGSAPIGV LPWLKIIGVS ILAFIVIEVE KWLRNRPAKA
AGHA
|
|---|
| |