Gene Dbac_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3231 
Symbol 
ID8378927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp3661869 
End bp3662288 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content56% 
IMG OID645002467 
Productnickel responsive regulator 
Protein accessionYP_003159722 
Protein GI256830994 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.758254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCAGA CTATTCGTTT TGGGGTGTCC CTGGACTCCG ATCTGCTGGA AAAATTCGAC 
GCACTGTGTG AGGAACGCTG CTATCAGACT CGCTCTGAAG CCATCCGCGA CCTTATCCGA 
GGCACTCTGG TGCAGAAGGA ATGGGAAGAC CTGAACAAGG AGATGGTCGG CACCCTGACC 
CTGGTCTATG ACCACCATCA CTCGGACCTG GCGCAAAAGA TGACCGAAAT CCAGCACTCA 
TCCCTTGATG TCATTGTCAC GTCCCTGCAC ATCCATCTTG ACCACCACAA CTGCATGGAG 
GTGCTCATTC TGCGCGGTCC GGGACAGGAC ATAAAGGCCA CCGCCGAACG GCTCATCTCC 
ACCAAGGGCG TGAAGCACGG CAAGCTGAAC CTAGCCACCA CCGGGCAGGA TCTGACCTGA
 
Protein sequence
MGQTIRFGVS LDSDLLEKFD ALCEERCYQT RSEAIRDLIR GTLVQKEWED LNKEMVGTLT 
LVYDHHHSDL AQKMTEIQHS SLDVIVTSLH IHLDHHNCME VLILRGPGQD IKATAERLIS 
TKGVKHGKLN LATTGQDLT