Gene Dbac_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3187 
Symbol 
ID8378883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3609565 
End bp3610026 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content63% 
IMG OID645002423 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_003159678 
Protein GI256830950 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTT CCGCGAAATC CAGATATGCG TCCCGGATCC TGCTTGACCT GGCCCTGCAC 
AACGAGGGAG TGCCCCATCG CGTGAACGAC ATTTCCGAGC GCACGGGAAT CACCGTGCCG
TTCATCGAAC AAATCATCAA GCCCCTGAAG CATGCCGGGA TGGTCACGAG CAAGCGCGGC
GCAGCAGGAG GACATCAGCT GGGCCGTTCA CCGGAGAACA TCACCCTGGG CGACATCGTG
CGCATCATGG AAGGCTCGGT GGAGCTTTCG GCCTGTTTGA GCGCGCCGGA GCTGTGCGAA
AGGACGGCTG TCTGCCCAAC CCGTGCGGCC TGGCAGCGGG CCACGGACGC CATGCTGCGC
GAACTGGACA CCATCACTCT GGCCGGGCTG GCCGGTGGCG CGCCCAATTG CTGCCAATTG
GCCGACGACT ATTTCGAGCG CGACAGCTCG TTGCCTGTTT GA
 
Protein sequence
MKLSAKSRYA SRILLDLALH NEGVPHRVND ISERTGITVP FIEQIIKPLK HAGMVTSKRG 
AAGGHQLGRS PENITLGDIV RIMEGSVELS ACLSAPELCE RTAVCPTRAA WQRATDAMLR
ELDTITLAGL AGGAPNCCQL ADDYFERDSS LPV