| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3181 |
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| Symbol | alaS |
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| ID | 8378877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3599961 |
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| End bp | 3602600 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645002417 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003159672 |
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| Protein GI | 256830944 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCAGTG CCGGTGAAAT TCGCAAACGG TTTTTGGAAT ATTTTCAGCA GCACGGACAC
AGCGTGCAGC CCAGTTCTTC CCTGGTGCCT CAGGACGACC CGACCCTTTT GTTCACCAAC
GCGGGAATGG TCCAGTTCAA GAAAATTTTT CTGGGCCAGG AGAAGCGTGA TTACACCAGG
GCCGCCACGT CCCAGAAATG TCTGCGCGTC GGCGGCAAGC ACAACGATCT TGAAAATGTG
GGGCGCACGG CGCGTCATCA CACTTTTTTC GAGATGCTCG GCAATTTTTC TTTTGGCGAT
TATTTCAAGG AAGACGCTAT CCGCCTGGCC TGGAATTTTG TGACCGTGGA GCTTGGTCTC
GACAAGGAGA AGCTCTTCGT GTCCATCTTC CGCGACGACG ACGAGGCAGG GGAACTGTGG
CAGAAAGTGG CCAGCGTGCC GGGCGAGCGC ATCTTCCGCC TCGGAGAGAA GGACAATTTC
TGGGCCATGG GCGACACCGG CCCTTGCGGC CCCTGCTCCG AAATCTATGT AGACCAGGGT
GCGGACATGG CCTGCGGCCC GGATTGCGGC ATCGGCAAAT GCGACTGCGA CCGCTATCTG
GAAATCTGGA ATCTGGTCTT CATGCAGTTC AACCGCTCCG AGGACGGAAC CCTGACCCCG
CTGCCCAAGC CCAGCATCGA CACGGGCATG GGCCTGGAGC GCATCACGGC CGTATGCCAG
GGCAAGCGTT CCAATTTCGA CACCGACCTC TTCCAGGGCC TCATTCAGGC CATGGCCAAG
AAGGCCGGCG TGGCCTACCA TCAGGGCGAG GATTCGGACA CGGCGCTACG TGTCATCGCC
GACCACAGCC GCTCCATCGC TTTTCTGCTG GCTGACGGCA TGCTCCCGTC CAACGAAGGT
CGCGGCTACG TGCTGCGTCG TCTGATCCGC CGCGCCTATC GTTTCGGCAA GCTGCTCGGC
TTTGACGAAC CCTTCCTGTG CGAGACCACG GACCAGGTCG TGAGCGAGAT GGGCGACACG
TTTCCGGAGT TGGTCGCCAG CCGGGAGTTC ATGGTCCGCG TCGTGCGCCA GGAGGAAGAG
CGTTTCGGGG AGACCCTGGA CAAGGGCCTG CGCATCCTCG AGGACGAGAT GGCGTCGCTG
GCCGCCGCAG GTAGCAAAAC CATCACCGGC GAGACGGCTT TTAAACTTTA CGACACCTAT
GGCTTCCCTC TCGATATCGT CAACGATATC GCTGAGAAGC AGGGTTTTTT GGTAGACGAG
GCGGGTTTTC GCGAGCACAT GTCCGTGCAG AAAAAGAAAT CCAAGCAGGC CTGGGCCGGT
TCCGGCGACA AGGGCCTGGC CGGTCAGTTC GCGGCGCTCA TGGGCGCTGG ACTGGAGTCG
GAATTCATCG GCTATGATTG CCTGGCCGCG ACCAGCCGTA TTGTCGCCCT GCTTGATGCC
GAAGGCCAGC CTGTCGAGCG TCTGCGCTCG GGCGTTGGCT TCATGGTCAC TCTGAAGACG
CCGTTTTACG GCGAATCCGG TGGTCAGATG GGCGACACGG GCCGGGTGCA GGCCCCAACG
GGTAGCGCTC GCGTGCTTGA TACTTTGAAG CCCGCGCCTG CGCTGATCGT GCACAAGATC
GAGATCGGCG GTGGTGAAAT TCTGGCCGAT CAGGAAGTGG AACTTTTTGT CGAGGAGGGG
GAGCGCATCG CCACGGCGCG CAATCACTCC ACTACCCACC TCTTGCACGC GGCCCTGCGC
CGGGTGTTGG GCGAGCATGT CAAGCAGGCC GGATCTCTGG TCGGCCCCTC GCGTCTGCGT
TTCGACTTCA CGCACATCTC CGGCCTTTCG CCGGAAGAGC TGCGACAGGT CGAGGACGAG
GTCAACCGGG CCATTCTGGC CGACGCGCCC ATCGTGACCC AGGTCATGTC CTATGACGCA
GCCGTGCAGC AGAAGCAGGC CATGGCCCTT TTCGGCGAGA AGTACGAAGC CGATGTGCGC
GTGGTTGAGA TGGCCGGCGA ATCCGTGGAG CTCTGCGGCG GCACCCACTT GGCCTCCACG
GGCCAGGCCG GGTCGTTCGC CCTGCTGTCC GAGGCGGGCA TCGCCGCCGG GGTGCGGCGT
ATCGAAGCCC TGACCGGCTG GGACGCCCTG CGCCATTGGC AGGCTCAGCG CGAGGAAGTG
CGCACGGTAG CCGCCACGCT CAAGGCCGCG CCGCATGAGC TGGGCAAGAA AATCATCGCG
CTGCAGGATC AGGGCAAGGC GCTGGCCAAG GAGCTGCAGA CCCTGCAGGC CAGAGTCATG
TCCGAGAGCG GCAGGGATCT GGCGTCGGAG GCCAAGGACA TCTCCGGCAT GAAGGTCCTG
GCCAGGAAGG TTGACGCTCC AGACATGAAT GCGCTCAGGA ATCTCATGGA CGATCTGCGT
TCCAAGCTCT CAAGCGGTAT CATCGCCCTG GCCGCCGAGA TCGACGGCAA GGCCATGCTG
GTGCTCGCGG TCAGCAAGGA TCTGCACGGG CGCTACACTG CCCCGGCGCT CATCAAGGAA
GTCTCGGACG AGATCAAGGG CGGTGGCGGC GGACGGCCCG AGCTGGCCCA GGCCGGTGGT
TCCGAGCCCG AGGGCATAAG CCGGGCGCTG GCGAAGCTGG AAGCCTTTTT ATCCAAGTAG
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| Protein sequence | MISAGEIRKR FLEYFQQHGH SVQPSSSLVP QDDPTLLFTN AGMVQFKKIF LGQEKRDYTR
AATSQKCLRV GGKHNDLENV GRTARHHTFF EMLGNFSFGD YFKEDAIRLA WNFVTVELGL
DKEKLFVSIF RDDDEAGELW QKVASVPGER IFRLGEKDNF WAMGDTGPCG PCSEIYVDQG
ADMACGPDCG IGKCDCDRYL EIWNLVFMQF NRSEDGTLTP LPKPSIDTGM GLERITAVCQ
GKRSNFDTDL FQGLIQAMAK KAGVAYHQGE DSDTALRVIA DHSRSIAFLL ADGMLPSNEG
RGYVLRRLIR RAYRFGKLLG FDEPFLCETT DQVVSEMGDT FPELVASREF MVRVVRQEEE
RFGETLDKGL RILEDEMASL AAAGSKTITG ETAFKLYDTY GFPLDIVNDI AEKQGFLVDE
AGFREHMSVQ KKKSKQAWAG SGDKGLAGQF AALMGAGLES EFIGYDCLAA TSRIVALLDA
EGQPVERLRS GVGFMVTLKT PFYGESGGQM GDTGRVQAPT GSARVLDTLK PAPALIVHKI
EIGGGEILAD QEVELFVEEG ERIATARNHS TTHLLHAALR RVLGEHVKQA GSLVGPSRLR
FDFTHISGLS PEELRQVEDE VNRAILADAP IVTQVMSYDA AVQQKQAMAL FGEKYEADVR
VVEMAGESVE LCGGTHLAST GQAGSFALLS EAGIAAGVRR IEALTGWDAL RHWQAQREEV
RTVAATLKAA PHELGKKIIA LQDQGKALAK ELQTLQARVM SESGRDLASE AKDISGMKVL
ARKVDAPDMN ALRNLMDDLR SKLSSGIIAL AAEIDGKAML VLAVSKDLHG RYTAPALIKE
VSDEIKGGGG GRPELAQAGG SEPEGISRAL AKLEAFLSK
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