Gene Dbac_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3135 
Symbol 
ID8378830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3549862 
End bp3550590 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content60% 
IMG OID645002370 
ProductABC transporter related 
Protein accessionYP_003159626 
Protein GI256830898 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTGAAA CGCCCATTTT CGCCCTGCAA AACGTGTCCT TTGCCTACCC TTCGGGAGGC 
GCGGTACTAC ATGACGTGAA CTTCGCCTTT GCCCAGGGAC AGAAAATTGG GCTTTACGGC
ACCAACGGCA GCGGCAAGAC CACCCTTTTC CATATCGTCA TGGGGCTCAT GAGCCCGCAA
CGCGGCCAGG TCCTTTTCCA TGGCGAACCG GTGCGCGGGG AAAAGGAATT TCGCGCCCTG
CGCCGCGAGG TCGGCATGGT CCTGCAGAAC GCGGAAGACC AGCTCTTCAA CCCCACGGTG
CTCGATGACG TGGCTTTTGG CCCCTTGAAT CTGCGAATGT CCGTGGACGA GGCGCGGAAA
AGATCCTTGC AGACCCTGAA GGAACTGGGA CTGGACGGAT TCGAGGGTCG TTTGACCCAC
CGCCTGTCCG GAGGGGAAAA AAAGCTGGTT TCCCTGGCCA CGATCCTGTC CATGCAGCCA
AAAGTCCTGC TGCTGGACGA GCCCACCAAC GGCCTGGACC CGCAGACCAG GGAGCGCATC
ATCGAAATTC TGGACAGCCT GCCCACGGCC CGCATCATCA TTTCCCATGA CTGGGACTTC
CTGGCGCGGA CAACGACGCA GTTCATGACC ATAAAAAACG GCCGCCTCGT CACCGACGTG
CCGCATTTGC CGCACCGTCA CGTGCACGCC CATCCGCTCG GCGACGAACC TCACCATCAC
CACGACTGA
 
Protein sequence
MSETPIFALQ NVSFAYPSGG AVLHDVNFAF AQGQKIGLYG TNGSGKTTLF HIVMGLMSPQ 
RGQVLFHGEP VRGEKEFRAL RREVGMVLQN AEDQLFNPTV LDDVAFGPLN LRMSVDEARK
RSLQTLKELG LDGFEGRLTH RLSGGEKKLV SLATILSMQP KVLLLDEPTN GLDPQTRERI
IEILDSLPTA RIIISHDWDF LARTTTQFMT IKNGRLVTDV PHLPHRHVHA HPLGDEPHHH
HD